RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 BRAT1Q6PJG6 821 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 KDM7AQ6ZMT4 941 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 DBX2Q6ZNG2 339 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 PTAR1Q7Z6K3 402 aaPredicted RBP18.59■□□□□ 0.57
COPE-201ENST00000262812 RHOT1Q8IXI2 618 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.59■□□□□ 0.57
COPE-201ENST00000262812 CCNYQ8ND76 341 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 PDCD6IPQ8WUM4 868 aaKnown RBP18.59■□□□□ 0.57
COPE-201ENST00000262812 FAF2Q96CS3 445 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 GOLPH3Q9H4A6 298 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 NOD2Q9HC29 1040 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 NT5MQ9NPB1 228 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 LUC7LQ9NQ29 371 aaKnown RBP18.59■□□□□ 0.57
COPE-201ENST00000262812 PCDHGC4Q9Y5F7 938 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 HS3ST3A1Q9Y663 406 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 ALG6Q9Y672 507 aa18.59■□□□□ 0.57
COPE-201ENST00000262812 PLXNA2O75051 1894 aa18.58■□□□□ 0.57
COPE-201ENST00000262812 C3orf70A6NLC5 250 aaPredicted RBP18.58■□□□□ 0.56
COPE-201ENST00000262812 GOLGA8CPA6NN73 597 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 A8MX80 341 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 FPGTO14772 594 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 FLRT2O43155 660 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 PCDHGA12O60330 932 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 CBFA2T3O75081 653 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 TM7SF2O76062 418 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 SUOXP51687 545 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 AP1S1P61966 158 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 ELP6Q0PNE2 266 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 HNRNPDQ14103 355 aaKnown RBP18.58■□□□□ 0.56
COPE-201ENST00000262812 IFI16Q16666 785 aaKnown RBP18.58■□□□□ 0.56
COPE-201ENST00000262812 TMEM52BQ4KMG9 183 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 LRRC38Q5VT99 294 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 RAD9BQ6WBX8 426 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 RFX6Q8HWS3 928 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 LRRC49Q8IUZ0 686 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.58■□□□□ 0.56
COPE-201ENST00000262812 NUDCD1Q96RS6 583 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 KLF6Q99612 283 aaPredicted RBP18.58■□□□□ 0.56
COPE-201ENST00000262812 CAAP1Q9H8G2 361 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 ERVMER34-1Q9H9K5 563 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 COQ6Q9Y2Z9 468 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 HEY1Q9Y5J3 304 aa18.58■□□□□ 0.56
COPE-201ENST00000262812 SPTBN2O15020 2390 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 TSPAN11A1L157 253 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 RCCD1A6NED2 376 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 A6NNZ2 444 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 RIOK3O14730 519 aaKnown RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 MATN3O15232 486 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 SDC3O75056 442 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 IPO7O95373 1038 aaKnown RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 TOP3BO95985 862 aaKnown RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 HSPA9P38646 679 aaKnown RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 NAP1L1P55209 391 aaKnown RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 LLGL1Q15334 1064 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 ZNF542PQ5EBM4 170 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 ABI3BPQ7Z7G0 1075 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 ZSCAN30Q86W11 494 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 PNPLA1Q8N8W4 532 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 SAP25Q8TEE9 199 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 LENG8Q96PV6 779 aaPredicted RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 BAG1Q99933 345 aaPredicted RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 RBM22Q9NW64 420 aaKnown RBP eCLIP18.57■□□□□ 0.56
COPE-201ENST00000262812 DDX56Q9NY93 547 aaKnown RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 ATP8A1Q9Y2Q0 1164 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 TTLL3Q9Y4R7 772 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 NCOR2Q9Y618 2525 aa18.57■□□□□ 0.56
COPE-201ENST00000262812 ASCC3Q8N3C0 2202 aaKnown RBP18.57■□□□□ 0.56
COPE-201ENST00000262812 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.56■□□□□ 0.56
COPE-201ENST00000262812 TRAFD1O14545 582 aaPredicted RBP18.56■□□□□ 0.56
COPE-201ENST00000262812 LZTS3O60299 673 aaPredicted RBP18.56■□□□□ 0.56
COPE-201ENST00000262812 NEBLO76041 1014 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 CR2P20023 1033 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 SPINK2P20155 84 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 MX2P20592 715 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 FECHP22830 423 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 CCNCP24863 283 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 PMLP29590 882 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 GRK6P43250 576 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 RXRGP48443 463 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 LIG3P49916 1009 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 POLR2LP62875 67 aaKnown RBP18.56■□□□□ 0.56
COPE-201ENST00000262812 DYNLT1P63172 113 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 FAM182AQ5T1J6 154 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 TIGD7Q6NT04 549 aaPredicted RBP18.56■□□□□ 0.56
COPE-201ENST00000262812 NPNTQ6UXI9 565 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 OXR1Q8N573 874 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 TEX26Q8N6G2 289 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 EID2Q8N6I1 236 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 ACRBPQ8NEB7 543 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 ASB12Q8WXK4 309 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 CENPTQ96BT3 561 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 ECHDC3Q96DC8 303 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 SEMA3CQ99985 751 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 MGME1Q9BQP7 344 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 MBNL1Q9NR56 388 aaKnown RBP18.56■□□□□ 0.56
COPE-201ENST00000262812 DTLQ9NZJ0 730 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 SALL4Q9UJQ4 1053 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 REXO2Q9Y3B8 237 aaKnown RBP18.56■□□□□ 0.56
COPE-201ENST00000262812 DUSP10Q9Y6W6 482 aa18.56■□□□□ 0.56
COPE-201ENST00000262812 CACNA1EQ15878 2313 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms