RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 RMDN1Q96DB5 314 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 MTBPQ96DY7 904 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 ZFYVE19Q96K21 471 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 MSLNLQ96KJ4 702 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 CPNE1Q99829 537 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 SELENOSQ9BQE4 189 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 ECT2Q9H8V3 914 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 NSMCE4AQ9NXX6 385 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 TXNDC16Q9P2K2 825 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 TNRC18O15417 2968 aaPredicted RBP13.11□□□□□ -0.31
VAMP7-201ENST00000262640 CCDC78A2IDD5 438 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 A6NNZ2 444 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 UGT1A9O60656 530 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 ZNF821O75541 412 aaPredicted RBP13.11□□□□□ -0.31
VAMP7-201ENST00000262640 FAM155BO75949 473 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 ASLP04424 464 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 SNRPAP09012 282 aaKnown RBP13.11□□□□□ -0.31
VAMP7-201ENST00000262640 LAMP2P13473 410 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 TUBB8Q3ZCM7 444 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 ESRP1Q6NXG1 681 aaKnown RBP13.11□□□□□ -0.31
VAMP7-201ENST00000262640 PACS1Q6VY07 963 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 ETFBKMTQ8IXQ9 262 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 CPA6Q8N4T0 437 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 LPCAT1Q8NF37 534 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 BRSK1Q8TDC3 778 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 PEX13Q92968 403 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 UGT1A7Q9HAW7 530 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 UGT1A10Q9HAW8 530 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 UGT1A8Q9HAW9 530 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 EVLQ9UI08 416 aaPredicted RBP13.11□□□□□ -0.31
VAMP7-201ENST00000262640 ERVW-1Q9UQF0 538 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 PDE4DIPQ5VU43 2346 aa13.11□□□□□ -0.31
VAMP7-201ENST00000262640 MIA3Q5JRA6 1907 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 FOXO6A8MYZ6 492 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 SOCS5O75159 536 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 TULP3O75386 442 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 BRAFP15056 766 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 LTBRP36941 435 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
VAMP7-201ENST00000262640 BCL2L1Q07817 233 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 CNGA3Q16281 694 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 GEN1Q17RS7 908 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 HSP90AA5PQ58FG0 334 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 TEDDM1Q5T9Z0 273 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 BLOC1S5Q8TDH9 187 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 NECTIN4Q96NY8 510 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 SMC6Q96SB8 1091 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 ATP13A3Q9H7F0 1226 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 HPS4Q9NQG7 708 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.1□□□□□ -0.317e-8■■■■■ 27.2
VAMP7-201ENST00000262640 IL1RAPL1Q9NZN1 696 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 RIMKLBQ9ULI2 386 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 TRIM24O15164 1050 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 LDB2O43679 373 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 CRTAMO95727 393 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 MT-ND3P03897 115 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 GP5P40197 560 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 ARCN1P48444 511 aaKnown RBP13.1□□□□□ -0.31
VAMP7-201ENST00000262640 RPL26P61254 145 aaKnown RBP13.1□□□□□ -0.31
VAMP7-201ENST00000262640 ADGRE1Q14246 886 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 ARMC12Q5T9G4 340 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 TMEM215Q68D42 235 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 GRAMD4Q6IC98 578 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 RYBPQ8N488 228 aaPredicted RBP13.1□□□□□ -0.31
VAMP7-201ENST00000262640 PDCD6IPQ8WUM4 868 aaKnown RBP13.1□□□□□ -0.31
VAMP7-201ENST00000262640 MYO19Q96H55 970 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 TUBGCP5Q96RT8 1024 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 POMKQ9H5K3 350 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 SSU72Q9NP77 194 aaKnown RBP13.1□□□□□ -0.31
VAMP7-201ENST00000262640 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
VAMP7-201ENST00000262640 RPL26L1Q9UNX3 145 aaKnown RBP13.1□□□□□ -0.31
VAMP7-201ENST00000262640 ANKRD66B4E2M5 251 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 TRIM49D1C9J1S8 452 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 FZD6O60353 706 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 VAPBO95292 243 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 PGLSO95336 258 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 ATP5BP06576 529 aaKnown RBP13.09□□□□□ -0.31
VAMP7-201ENST00000262640 SRPRAP08240 638 aaKnown RBP13.09□□□□□ -0.31
VAMP7-201ENST00000262640 PDHA1P08559 390 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 PSMC3P17980 439 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 NNMTP40261 264 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 GABPB1Q06547 395 aaPredicted RBP13.09□□□□□ -0.31
VAMP7-201ENST00000262640 DLG2Q15700 870 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 GAB4Q2WGN9 574 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 MYLK3Q32MK0 819 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 ACCSLQ4AC99 568 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 CARD16Q5EG05 197 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 GRTP1Q5TC63 336 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 CNTN4Q8IWV2 1026 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 PLPP6Q8IY26 295 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 GABPB2Q8TAK5 448 aaPredicted RBP13.09□□□□□ -0.31
VAMP7-201ENST00000262640 ALKBH8Q96BT7 664 aaKnown RBP13.09□□□□□ -0.31
VAMP7-201ENST00000262640 FAM167BQ9BTA0 163 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 CAPS2Q9BXY5 557 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 IARS2Q9NSE4 1012 aaKnown RBP13.09□□□□□ -0.31
VAMP7-201ENST00000262640 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 DEC1Q9P2X7 70 aa13.09□□□□□ -0.31
VAMP7-201ENST00000262640 SMG5Q9UPR3 1016 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms