RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 FAM124BQ9H5Z6 455 aaPredicted RBP18.1■□□□□ 0.49
TRAF4-201ENST00000262395 WDCPQ9H6R7 721 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 FBXW11Q9UKB1 542 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 PCDHGA4Q9Y5G9 962 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 LOC285556D6RIA3 1793 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 A0A0G2JMZ2 1700 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 LRRC37A2A6NM11 1700 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 ADM5C9JUS6 153 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 CDH13P55290 713 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 SEMA3BQ13214 749 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 CAPRIN1Q14444 709 aaKnown RBP18.1■□□□□ 0.49
TRAF4-201ENST00000262395 DHFR2Q86XF0 187 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 SPPL2CQ8IUH8 684 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 HDAC11Q96DB2 347 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 SLC2A13Q96QE2 648 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 OLFM1Q99784 485 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 TBL1YQ9BQ87 522 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 PNPLA3Q9NST1 481 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 CROTQ9UKG9 612 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 TRHDEQ9UKU6 1024 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 ZNF711Q9Y462 761 aa18.1■□□□□ 0.49
TRAF4-201ENST00000262395 ERI2A8K979 691 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 SRP72O76094 671 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 HSPA1AP0DMV8 641 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 HSPA1BP0DMV9 641 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 CHRM3P20309 590 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ALDH3B2P48448 385 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 LILRA4P59901 499 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 MAP7D1Q3KQU3 841 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 HNRNPABQ99729 332 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 COLEC11Q9BWP8 271 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 DNAI2Q9GZS0 605 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ARHGEF38Q9NXL2 777 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 A8MT66 165 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 CCDC166P0CW27 439 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ATP5F1P24539 256 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 SLC7A1P30825 629 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 HADHAP40939 763 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 GALNT2Q10471 571 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 FAM83EQ2M2I3 478 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 PCID2Q5JVF3 399 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 BTBD8Q5XKL5 378 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 PIWIL4Q7Z3Z4 852 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 BNIPLQ7Z465 357 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 SH3RF2Q8TEC5 729 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 C3orf30Q96M34 536 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 MRPL57Q9BQC6 102 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 SOX17Q9H6I2 414 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 CLK4Q9HAZ1 481 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 SMOXQ9NWM0 555 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 UTP6Q9NYH9 597 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 CNOT11Q9UKZ1 510 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ZNF510Q9Y2H8 683 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 WDR90Q96KV7 1748 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 NR5A2O00482 541 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 UBFD1O14562 309 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 SLC25A27O95847 323 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ARCN1P48444 511 aaKnown RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 HK2P52789 917 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ADRM1Q16186 407 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 TAPT1Q6NXT6 567 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 TTC33Q6PID6 262 aaPredicted RBP18.09■□□□□ 0.49
TRAF4-201ENST00000262395 OFCC1Q8IZS5 231 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ZFP42Q96MM3 310 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 IGSF5Q9NSI5 407 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 PADI4Q9UM07 663 aa18.09■□□□□ 0.49
TRAF4-201ENST00000262395 ANKRD12Q6UB98 2062 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 PPP6CO00743 305 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 NRP2O60462 931 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 NPHS1O60500 1241 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 MT-ND1P03886 318 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 CPB1P15086 417 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 PRKAA2P54646 552 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 KIF19Q2TAC6 998 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 NHSL2Q5HYW2 709 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 NOTUMQ6P988 496 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 ALKAL1Q6UXT8 129 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 CHST15Q7LFX5 561 aaPredicted RBP18.08■□□□□ 0.49
TRAF4-201ENST00000262395 RETREG3Q86VR2 466 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 ARRDC4Q8NCT1 418 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 ANKRD49Q8WVL7 239 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 PBXIP1Q96AQ6 731 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 FBXO5Q9UKT4 447 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 DERAQ9Y315 318 aa18.08■□□□□ 0.49
TRAF4-201ENST00000262395 TCRBV3S1A0A5B6 114 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 SUPT7LO94864 414 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 CYP2C9P11712 490 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 CD151P48509 253 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 DAOAP59103 153 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 CCNA1P78396 465 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 CREB5Q02930 508 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 SQLEQ14534 574 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 TBCELQ5QJ74 424 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 FAM35AQ86V20 835 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 IFNEQ86WN2 208 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 RYBPQ8N488 228 aaPredicted RBP18.08■□□□□ 0.48
TRAF4-201ENST00000262395 TMEM40Q8WWA1 233 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 CYGBQ8WWM9 190 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 RANBP9Q96S59 729 aa18.08■□□□□ 0.48
TRAF4-201ENST00000262395 CD300AQ9UGN4 299 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms