RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HDAC11Q96DB2 347 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 MRPL57Q9BQC6 102 aaKnown RBP17.59■□□□□ 0.41
TRAM1-201ENST00000262213 EFHD1Q9BUP0 239 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 PLXNA1Q9UIW2 1896 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.59■□□□□ 0.41
TRAM1-201ENST00000262213 ARNTP27540 789 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 FRG1Q14331 258 aaKnown RBP17.59■□□□□ 0.41
TRAM1-201ENST00000262213 PCSK7Q16549 785 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 UGP2Q16851 508 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 PCID2Q5JVF3 399 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 MOB2Q70IA6 237 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 GPR141Q7Z602 305 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 SLC45A3Q96JT2 553 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 SLC2A13Q96QE2 648 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 DUS2Q9NX74 493 aaKnown RBP17.59■□□□□ 0.41
TRAM1-201ENST00000262213 CDC14AQ9UNH5 594 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 PIN4Q9Y237 131 aaKnown RBP17.59■□□□□ 0.41
TRAM1-201ENST00000262213 DERAQ9Y315 318 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 GMEB1Q9Y692 573 aa17.59■□□□□ 0.41
TRAM1-201ENST00000262213 NCAM2O15394 837 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 NRP2O60462 931 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 SLC25A27O95847 323 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 GALNT2Q10471 571 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 KIF19Q2TAC6 998 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 ZNF560Q96MR9 790 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 HNRNPABQ99729 332 aaKnown RBP17.58■□□□□ 0.41
TRAM1-201ENST00000262213 C16orf70Q9BSU1 422 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 UPF3AQ9H1J1 476 aaKnown RBP17.58■□□□□ 0.41
TRAM1-201ENST00000262213 WDCPQ9H6R7 721 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 ARHGEF38Q9NXL2 777 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 FBXW11Q9UKB1 542 aa17.58■□□□□ 0.41
TRAM1-201ENST00000262213 DNAJC25-GNG10A0A024R161 153 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 A8MT66 165 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 NR5A2O00482 541 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 COL6A2P12110 1019 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 CD151P48509 253 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 CCNA1P78396 465 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 SEMA3BQ13214 749 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 MAPRE2Q15555 327 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 FAM83EQ2M2I3 478 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 SPPL2CQ8IUH8 684 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 PPHLN1Q8NEY8 458 aaKnown RBP17.58■□□□□ 0.4
TRAM1-201ENST00000262213 RPL10LQ96L21 214 aaKnown RBP17.58■□□□□ 0.4
TRAM1-201ENST00000262213 MTF2Q9Y483 593 aaPredicted RBP17.58■□□□□ 0.4
TRAM1-201ENST00000262213 PTGDR2Q9Y5Y4 395 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.4
TRAM1-201ENST00000262213 ANKRD12Q6UB98 2062 aa17.58■□□□□ 0.4
TRAM1-201ENST00000262213 TCRBV3S1A0A5B6 114 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 MTSS1O43312 755 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 SBF1O95248 1867 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 MAPK10P53779 464 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CREB5Q02930 508 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 ARL13BQ3SXY8 428 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 ANKDD1AQ495B1 522 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 TBCELQ5QJ74 424 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 ACBD5Q5T8D3 534 aaPredicted RBP17.57■□□□□ 0.4
TRAM1-201ENST00000262213 KIAA0319Q5VV43 1072 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 BTBD8Q5XKL5 378 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 NOTUMQ6P988 496 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 LDB1Q86U70 411 aaPredicted RBP17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CYGBQ8WWM9 190 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 OLFM1Q99784 485 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 COLEC11Q9BWP8 271 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 RHOBTB2Q9BYZ6 727 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 MRPL40Q9NQ50 206 aaKnown RBP17.57■□□□□ 0.4
TRAM1-201ENST00000262213 SMOXQ9NWM0 555 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 RNF103-CHMP3A0A140T963 221 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CCL22O00626 93 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CPB1P15086 417 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 ESRRGP62508 458 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CAPRIN1Q14444 709 aaKnown RBP17.57■□□□□ 0.4
TRAM1-201ENST00000262213 NHSL2Q5HYW2 709 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 SAMD4BQ5PRF9 694 aaKnown RBP17.57■□□□□ 0.4
TRAM1-201ENST00000262213 BNIPLQ7Z465 357 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 LINC00523Q86TU6 105 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 KLHL23Q8NBE8 558 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 ZNF419Q96HQ0 510 aaPredicted RBP17.57■□□□□ 0.4
TRAM1-201ENST00000262213 IGSF5Q9NSI5 407 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 FBXO5Q9UKT4 447 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 SUPT7LO94864 414 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CD4P01730 458 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CDH13P55290 713 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 LILRA4P59901 499 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CTBSQ01459 385 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 GEN1Q17RS7 908 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 OFCC1Q8IZS5 231 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 AFAP1L2Q8N4X5 818 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 C12orf43Q96C57 262 aaKnown RBP17.57■□□□□ 0.4
TRAM1-201ENST00000262213 ISOC1Q96CN7 298 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 FSD1LQ9BXM9 530 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 TMEM30AQ9NV96 361 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 CD300AQ9UGN4 299 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 SLC8A2Q9UPR5 921 aa17.57■□□□□ 0.4
TRAM1-201ENST00000262213 ZSCAN9O15535 394 aaPredicted RBP17.56■□□□□ 0.4
TRAM1-201ENST00000262213 SUPT3HO75486 399 aa17.56■□□□□ 0.4
TRAM1-201ENST00000262213 ARCN1P48444 511 aaKnown RBP17.56■□□□□ 0.4
TRAM1-201ENST00000262213 DAOAP59103 153 aa17.56■□□□□ 0.4
TRAM1-201ENST00000262213 IFNEQ86WN2 208 aa17.56■□□□□ 0.4
TRAM1-201ENST00000262213 OR2T34Q8NGX1 318 aa17.56■□□□□ 0.4
TRAM1-201ENST00000262213 OR2T3Q8NH03 318 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms