RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 BTBD8Q5XKL5 378 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 CLEC6AQ6EIG7 209 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 NLGN2Q8NFZ4 835 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 CCT7Q99832 543 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 TMEM79Q9BSE2 394 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 NDFIP2Q9NV92 336 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 ARHGAP10A1A4S6 786 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 GPC4O75487 556 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 USP41Q3LFD5 358 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 RAB41Q5JT25 222 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 PM20D1Q6GTS8 502 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 DCLRE1AQ6PJP8 1040 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 CHSY3Q70JA7 882 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 TRIML2Q8N7C3 387 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 C2CD4AQ8NCU7 369 aaPredicted RBP19.5■□□□□ 0.71
SCARB1-201ENST00000261693 DDI1Q8WTU0 396 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 ARHGEF38Q9NXL2 777 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 TMCO1Q9UM00 188 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 CEPT1Q9Y6K0 416 aa19.5■□□□□ 0.71
SCARB1-201ENST00000261693 ZNF236Q9UL36 1845 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 SMIM35A0A1B0GVV1 85 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 A8MT66 165 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 TRIM24O15164 1050 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 C8BP07358 591 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 RPL10P27635 214 aaKnown RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 PRAMEF19Q5SWL8 479 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 LIN28AQ9H9Z2 209 aaKnown RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 SPON1Q9HCB6 807 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 FBRSL1Q9HCM7 1045 aaKnown RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 SPAG4Q9NPE6 437 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 HEMK1Q9Y5R4 338 aaPredicted RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 A0A087X1B8 175 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 HHLA1C9JL84 531 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 PSMD3O43242 534 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 CACNG3O60359 315 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 ANXA9O76027 345 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 PENKP01210 267 aaPredicted RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 CCDC166P0CW27 439 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 CKMT2P17540 419 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 CDH2P19022 906 aaPredicted RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 AXLP30530 894 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 NME5P56597 212 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 COG7P83436 770 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 SQLEQ14534 574 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 NEPROQ6NW34 567 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 ARHGAP12Q8IWW6 846 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 STON2Q8WXE9 905 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 ZNF597Q96LX8 424 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 FCRL5Q96RD9 977 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 TSPYL2Q9H2G4 693 aaPredicted RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 ADARB2Q9NS39 739 aaKnown RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 IRAK4Q9NWZ3 460 aa19.49■□□□□ 0.71
SCARB1-201ENST00000261693 CNOT11Q9UKZ1 510 aaKnown RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 MTF2Q9Y483 593 aaPredicted RBP19.49■□□□□ 0.71
SCARB1-201ENST00000261693 TTC3P53804 2025 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 ZNF839A8K0R7 811 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 PLOD2O00469 737 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 MRASO14807 208 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 TIPRLO75663 272 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 IPO13O94829 963 aaKnown RBP19.48■□□□□ 0.71
SCARB1-201ENST00000261693 HLA-DQB2P05538 268 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 DNAJB13P59910 316 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 CDC42EP1Q00587 391 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 FAM83EQ2M2I3 478 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 TBC1D25Q3MII6 688 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 TECRLQ5HYJ1 363 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 HMBOX1Q6NT76 420 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 SLC39A8Q9C0K1 460 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 MEAF6Q9HAF1 191 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 IL1RL2Q9HB29 575 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 MAFKO60675 156 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 SNRPB2P08579 225 aaKnown RBP19.48■□□□□ 0.71
SCARB1-201ENST00000261693 CDK4P11802 303 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 HOXD8P13378 290 aaPredicted RBP19.48■□□□□ 0.71
SCARB1-201ENST00000261693 CCNCP24863 283 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 CLCNKBP51801 687 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 C6orf10Q5SRN2 563 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 LDB1Q86U70 411 aaPredicted RBP19.48■□□□□ 0.71
SCARB1-201ENST00000261693 NUP93Q8N1F7 819 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 TSGA13Q96PP4 275 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 PPP1R10Q96QC0 940 aaKnown RBP19.48■□□□□ 0.71
SCARB1-201ENST00000261693 TREX1Q9NSU2 369 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 RBM22Q9NW64 420 aaKnown RBP eCLIP19.48■□□□□ 0.712e-16■■■■■ 75.9
SCARB1-201ENST00000261693 GALNT8Q9NY28 637 aa19.48■□□□□ 0.71
SCARB1-201ENST00000261693 PDLIM1O00151 329 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 CCL22O00626 93 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 TRMUO75648 421 aaKnown RBP19.47■□□□□ 0.71
SCARB1-201ENST00000261693 DNAJB2P25686 324 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 LRPAP1P30533 357 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 POU4F1Q01851 419 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 KRT80Q6KB66 452 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 C3orf58Q8NDZ4 430 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 DQX1Q8TE96 717 aaKnown RBP19.47■□□□□ 0.71
SCARB1-201ENST00000261693 ANKRD49Q8WVL7 239 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 CNOT6Q9ULM6 557 aaKnown RBP19.47■□□□□ 0.71
SCARB1-201ENST00000261693 NEU3Q9UQ49 428 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.47■□□□□ 0.71
SCARB1-201ENST00000261693 UBFD1O14562 309 aaKnown RBP19.47■□□□□ 0.71
SCARB1-201ENST00000261693 DNAJB1P25685 340 aa19.47■□□□□ 0.71
SCARB1-201ENST00000261693 SLC7A2P52569 658 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms