RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 FRG1Q14331 258 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 TGFBIQ15582 683 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 TIGD5Q53EQ6 642 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 PPM1JQ5JR12 505 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 SPANXN3Q5MJ09 141 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 PPM1LQ5SGD2 360 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 SYPL2Q5VXT5 272 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 NAPRTQ6XQN6 538 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 PYROXD2Q8N2H3 581 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 FIBCD1Q8N539 461 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 PACRGLQ8N7B6 248 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 DDHD1Q8NEL9 900 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 ZMIZ2Q8NF64 920 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 TNIP2Q8NFZ5 429 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 MYLPFQ96A32 169 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 ZNF512Q96ME7 567 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 EFHD1Q9BUP0 239 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 DRC3Q9H069 523 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 WDR6Q9NNW5 1121 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 SNX15Q9NRS6 342 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 MIOSQ9NXC5 875 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 TRHDEQ9UKU6 1024 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 COQ6Q9Y2Z9 468 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 TMED5Q9Y3A6 229 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 COL4A4P53420 1690 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 FUOMA2VDF0 154 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CASTOR2A6NHX0 329 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 TRIM64BA6NI03 449 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 YJEFN3A6XGL0 299 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 MEIS3P2A8K0S8 358 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 NRP1O14786 923 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 PSMD3O43242 534 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 B3GAT3O94766 335 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 VAPBO95292 243 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 MAP3K6O95382 1288 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 ESRRBO95718 433 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 FYNP06241 537 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 DNAJB2P25686 324 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CTGFP29279 349 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 GRIA1P42261 906 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CXCR3P49682 368 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 PRKAA1Q13131 559 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 NRF1Q16656 503 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 PPP4R4Q6NUP7 873 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 DCLRE1AQ6PJP8 1040 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CLEC14AQ86T13 490 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CLVS1Q8IUQ0 354 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 ANKFN1Q8N957 763 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CCNYQ8ND76 341 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 ARNTL2Q8WYA1 636 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 USP13Q92995 863 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 LPPQ93052 612 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 C12orf43Q96C57 262 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 HDAC11Q96DB2 347 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 COLEC11Q9BWP8 271 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 GATA5Q9BWX5 397 aaPredicted RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 IL22Q9GZX6 179 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CCDC68Q9H2F9 335 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 WDCPQ9H6R7 721 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 AGO3Q9H9G7 860 aaKnown RBP10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 OXSMQ9NWU1 459 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 DDIT4Q9NX09 232 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 CDYLQ9Y232 598 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 NOD1Q9Y239 953 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 FADS3Q9Y5Q0 445 aa10.9□□□□□ -0.66
CHRNA1-201ENST00000261007 TCRBV3S1A0A5B6 114 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 CCDC162PA2VCL2 907 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 GRID2O43424 1007 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 HTRA2O43464 458 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 OCM2P0CE71 109 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 OCMP0CE72 109 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 ERCC2P18074 760 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 CD52P31358 61 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 KCNC4Q03721 635 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 PTK2BQ14289 1009 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 KCNA10Q16322 511 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 NHSL2Q5HYW2 709 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 BRMS1LQ5PSV4 323 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 CASC4Q6P4E1 433 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 DCDC5Q6ZRR9 648 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 HFE2Q6ZVN8 426 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 ZNF354CQ86Y25 554 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 COLGALT2Q8IYK4 626 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 REM2Q8IYK8 340 aaPredicted RBP10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 DCLK2Q8N568 766 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 MFSD2AQ8NA29 543 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 C3orf58Q8NDZ4 430 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 NDRG1Q92597 394 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 ATP6V1E2Q96A05 226 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 THAP11Q96EK4 314 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 ABHD8Q96I13 439 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 CNDP2Q96KP4 475 aaKnown RBP10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 SUSD3Q96L08 255 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 PPP1R2P1Q96PQ5 205 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 LGMNQ99538 433 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 RBBP8Q99708 897 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 OSBPL2Q9H1P3 480 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 PRDM12Q9H4Q4 367 aa10.89□□□□□ -0.67
CHRNA1-201ENST00000261007 GNPTGQ9UJJ9 305 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms