RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 UMPSP11172 480 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 NTSP30990 170 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 GJA8P48165 433 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ARRB1P49407 418 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 RPS7P62081 194 aaKnown RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 KCNMA1Q12791 1236 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ZNHIT3Q15649 155 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 KCTD19Q17RG1 926 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 PPP1R15BQ5SWA1 713 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CYP2U1Q7Z449 544 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 VN1R5Q7Z5H4 357 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 PHF13Q86YI8 300 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 BEND7Q8N7W2 519 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 OR4L1Q8NH43 312 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CCDC126Q96EE4 140 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 PKNOX2Q96KN3 472 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ATP6V1G3Q96LB4 118 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 KREMEN1Q96MU8 473 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CPNE1Q99829 537 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ING2Q9H160 280 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 OR2AG1Q9H205 316 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CAAP1Q9H8G2 361 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 KRCC1Q9NPI7 259 aaPredicted RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ATP6V1HQ9UI12 483 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CHURC1-FNTBB4DL54 471 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 NR5A2O00482 541 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CD3EAPO15446 510 aaKnown RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 MFSD11O43934 449 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 WDR47O94967 919 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 MPOP05164 745 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CES1P23141 567 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 SPAM1P38567 509 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ACTR1BP42025 376 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 DAOAP59103 153 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ACTR1AP61163 376 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 SRSF11Q05519 484 aaKnown RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 VAC14Q08AM6 782 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 TAF5Q15542 800 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 BMT2Q1RMZ1 405 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 IL27RAQ6UWB1 636 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 ZCCHC10Q8TBK6 192 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 CASKIN2Q8WXE0 1202 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 REXO5Q96IC2 774 aaKnown RBP6.4□□□□□ -1.39
BRIP1-201ENST00000259008 PAAF1Q9BRP4 392 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 LMAN1LQ9HAT1 526 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 COQ6Q9Y2Z9 468 aa6.4□□□□□ -1.39
BRIP1-201ENST00000259008 NAV1Q8NEY1 1877 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 KDM3BQ7LBC6 1761 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 DHX15O43143 795 aaKnown RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 CCDC22O60826 627 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 BANF1O75531 89 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 CYP1A2P05177 515 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ADRA1BP35368 520 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 MLLT3P42568 568 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 IRF8Q02556 426 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 UPP1Q16831 310 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TCEAL5Q5H9L2 206 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 LRRC55Q6ZSA7 311 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TEX9Q8N6V9 391 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ILKAPQ9H0C8 392 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 WDR26Q9H7D7 661 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 VTI1BQ9UEU0 232 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 BAZ2AQ9UIF9 1905 aaKnown RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SLX4Q8IY92 1834 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 IQCF5A8MTL0 148 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 QSOX1O00391 747 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ZNF8P17098 575 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 FLT3P36888 993 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 SEPHS1P49903 392 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 OVGP1Q12889 678 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 PFKFB4Q16877 469 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 MIIPQ5JXC2 388 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 UBXN11Q5T124 520 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 AGMOQ6ZNB7 445 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 KATNAL2Q8IYT4 538 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TXNDC5Q8NBS9 432 aaKnown RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 FBXO15Q8NCQ5 510 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 OR4K2Q8NGD2 314 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 HDAC10Q969S8 669 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 HHIPQ96QV1 700 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 CDH19Q9H159 772 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TRIT1Q9H3H1 467 aaKnown RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 FAM83DQ9H4H8 585 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ERVK-5Q9HDB9 667 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 CHST7Q9NS84 486 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 PCDH10Q9P2E7 1040 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 CCDC88AQ3V6T2 1871 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 INSIG1O15503 277 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 MMP20O60882 483 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 MT-CYBP00156 380 aaPredicted RBP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 GSTM1P09488 218 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ACP5P13686 325 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 COX7A2P14406 83 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 HLA-DPA1P20036 260 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 IL10P22301 178 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 ITPKAP23677 461 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 CSTF2P33240 577 aaKnown RBP eCLIP6.39□□□□□ -1.39
BRIP1-201ENST00000259008 PTPN9P43378 593 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 TRPC1P48995 793 aa6.39□□□□□ -1.39
BRIP1-201ENST00000259008 WNT3AP56704 352 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms