RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PPP1R2P3Q6NXS1 205 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 ARHGAP36Q6ZRI8 547 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 RFX8Q6ZV50 586 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 CYP4V2Q6ZWL3 525 aaPredicted RBP19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 ZSWIM9Q86XI8 627 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 TSEN2Q8NCE0 465 aaKnown RBP19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 IFI44Q8TCB0 444 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 ZNF653Q96CK0 615 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 PCDH12Q9NPG4 1184 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 MYO1AQ9UBC5 1043 aa19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 APOBEC3BQ9UH17 382 aaKnown RBP19.2■□□□□ 0.66
TM6SF1-201ENST00000258909 RP1P56715 2156 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 BAHCC1Q9P281 2608 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 A0A1B0GTH6 734 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 ARHGAP42A6NI28 874 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 DFFAO00273 331 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 PRPSAP2O60256 369 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 PALMO75781 387 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 RNF8O76064 485 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 HTR7P34969 479 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 DUSP3P51452 185 aaPredicted RBP19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 ADKP55263 362 aaKnown RBP19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 COL9A2Q14055 689 aaPredicted RBP19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 PTK2BQ14289 1009 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 TCEA2Q15560 299 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 UGP2Q16851 508 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 TMEM52BQ4KMG9 183 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 PRRT3Q5FWE3 981 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 CDCP2Q5VXM1 449 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 ZCCHC8Q6NZY4 707 aaKnown RBP19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 GUSBP11Q6P575 273 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 CRTC1Q6UUV9 634 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 NYAP1Q6ZVC0 841 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 ARHGAP12Q8IWW6 846 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 TP53INP2Q8IXH6 220 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 PHACTR4Q8IZ21 702 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 CACTIN-AS1Q8N1I8 211 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 NPWQ8N729 165 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 IL12RB2Q99665 862 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 C1QTNF7Q9BXJ2 289 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 ABCG4Q9H172 646 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 CSNK1G3Q9Y6M4 447 aa19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 FASNP49327 2511 aaKnown RBP19.19■□□□□ 0.66
TM6SF1-201ENST00000258909 A0A1W2PQC6 194 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 GZMAP12544 262 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 EIF2S3P41091 472 aaKnown RBP19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 PRKCIP41743 596 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 ABCG1P45844 678 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 YPEL5P62699 121 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 ELP6Q0PNE2 266 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 SOWAHCQ53LP3 525 aaPredicted RBP19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 CFAP58Q5T655 872 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 FAXCQ5TGI0 409 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 SRLQ86TD4 932 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 MAPK15Q8TD08 544 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 BTN2A2Q8WVV5 523 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 LRRC61Q9BV99 259 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 DONSONQ9NYP3 566 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 SPASTQ9UBP0 616 aa19.18■□□□□ 0.66
TM6SF1-201ENST00000258909 TSPAN11A1L157 253 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 RIOK3O14730 519 aaKnown RBP19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 LRCH4O75427 683 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 SERPINC1P01008 464 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 MPOP05164 745 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 GP1BAP07359 652 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 CELA2BP08218 269 aaPredicted RBP19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 C6P13671 934 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 TGM2P21980 687 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 LIG3P49916 1009 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 LRRC14Q15048 493 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 IQCB1Q15051 598 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 WSCD2Q2TBF2 565 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 AFMIDQ63HM1 303 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 EFL1Q7Z2Z2 1120 aaKnown RBP19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 CINPQ9BW66 212 aaPredicted RBP19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 SLC13A1Q9BZW2 595 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 CLPBQ9H078 707 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 SP110Q9HB58 689 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 EVA1BQ9NVM1 165 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 CWC15Q9P013 229 aaKnown RBP19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 PTPRQQ9UMZ3 2332 aa19.17■□□□□ 0.66
TM6SF1-201ENST00000258909 EIF3CLB5ME19 914 aaKnown RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 MUSKO15146 869 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 CASC3O15234 703 aaKnown RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 USP12O75317 370 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 CSO75390 466 aaKnown RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 TCF4P15884 667 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 SUOXP51687 545 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 PPARDQ03181 441 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 GRM3Q14832 879 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 NR1I3Q14994 352 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 ERAP2Q6P179 960 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 MACC1Q6ZN28 852 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 HCAR2Q8TDS4 363 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 FNIP1Q8TF40 1166 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 TSACCQ96A04 125 aaPredicted RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 ZNF641Q96N77 438 aaPredicted RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 DEPDC7Q96QD5 511 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 EIF3CQ99613 913 aaKnown RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 USP29Q9HBJ7 922 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms