RNA–Protein interactions for RNA: ENST00000252542.8

SAFB2-201, Transcript of scaffold attachment factor B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAFB2, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-201ENST00000252542 SKA2Q8WVK7 121 aaPredicted RBP15.17■□□□□ 0.02
SAFB2-201ENST00000252542 PIF1Q9H611 641 aa15.17■□□□□ 0.02
SAFB2-201ENST00000252542 LNPEPQ9UIQ6 1025 aa15.17■□□□□ 0.02
SAFB2-201ENST00000252542 PLXNA1Q9UIW2 1896 aa15.17■□□□□ 0.02
SAFB2-201ENST00000252542 F5H5T6 163 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 FMO4P31512 558 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 KIF19Q2TAC6 998 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 RAB41Q5JT25 222 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 BHLHA9Q7RTU4 235 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 TMEM135Q86UB9 458 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 RTL3Q8N8U3 475 aaKnown RBP15.16■□□□□ 0.02
SAFB2-201ENST00000252542 TLR8Q9NR97 1041 aaKnown RBP15.16■□□□□ 0.02
SAFB2-201ENST00000252542 RRN3Q9NYV6 651 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 SLC7A8Q9UHI5 535 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 Q9Y3F1 56 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 LRRC14BA6NHZ5 514 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 GJA1P17302 382 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 TBL3Q12788 808 aaKnown RBP15.16■□□□□ 0.02
SAFB2-201ENST00000252542 LPCAT4Q643R3 524 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 ACAD11Q709F0 780 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 LRRC8DQ7L1W4 858 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 IFNEQ86WN2 208 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 MARCH4Q9P2E8 410 aaPredicted RBP15.16■□□□□ 0.02
SAFB2-201ENST00000252542 PPM1HQ9ULR3 514 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 SIX3O95343 332 aaPredicted RBP15.16■□□□□ 0.02
SAFB2-201ENST00000252542 TFEBP19484 476 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 RAB10P61026 200 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 RPS6KA2Q15349 733 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 FAM83EQ2M2I3 478 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 FUT10Q6P4F1 479 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 TPGS1Q6ZTW0 290 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 FRMD7Q6ZUT3 714 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 PTCD3Q96EY7 689 aaKnown RBP15.16■□□□□ 0.02
SAFB2-201ENST00000252542 MRGPRX2Q96LB1 330 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 NPAS2Q99743 824 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 RHOJQ9H4E5 214 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 FBXO44Q9H4M3 255 aa15.16■□□□□ 0.02
SAFB2-201ENST00000252542 A0A1W2PQ45 241 aaPredicted RBP15.15■□□□□ 0.02
SAFB2-201ENST00000252542 A0A1W2PQY0 241 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 KLHL33A6NCF5 533 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 CTPS1P17812 591 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 GRK2P25098 689 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ZRANB3Q5FWF4 1079 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 CDRT15Q96T59 188 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ATP13A1Q9HD20 1204 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 RGS18Q9NS28 235 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 V9GYQ6 96 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ARHGEF37A1IGU5 675 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 TRAFD1O14545 582 aaPredicted RBP15.15■□□□□ 0.02
SAFB2-201ENST00000252542 CCNCP24863 283 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 HARS2P49590 506 aaKnown RBP15.15■□□□□ 0.02
SAFB2-201ENST00000252542 SEMA3BQ13214 749 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 TRIP10Q15642 601 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 DEFB115Q30KQ5 88 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 LRRC8EQ6NSJ5 796 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 CD300LGQ6UXG3 332 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 MAVSQ7Z434 540 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 SPATA24Q86W54 205 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 VAT1Q99536 393 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 RNF208Q9H0X6 261 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 NCKIPSDQ9NZQ3 722 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 SDK1Q7Z5N4 2213 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ZBTB14O43829 449 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 DLX3O60479 287 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ZNF623O75123 536 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 PGM3O95394 542 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 SERPINA6P08185 405 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 MAGEA6P43360 314 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 PFKFB4Q16877 469 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 KLC3Q6P597 504 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 GALNT4Q8N4A0 578 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 EZH1Q92800 747 aaPredicted RBP15.15■□□□□ 0.02
SAFB2-201ENST00000252542 RCN3Q96D15 328 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 SORT1Q99523 831 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 FAM124BQ9H5Z6 455 aaPredicted RBP15.15■□□□□ 0.02
SAFB2-201ENST00000252542 CLIC5Q9NZA1 410 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ZNF212Q9UDV6 495 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ATP11BQ9Y2G3 1177 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 TCAF1Q9Y4C2 921 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ASB3Q9Y575 518 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 PTGDR2Q9Y5Y4 395 aa15.15■□□□□ 0.02
SAFB2-201ENST00000252542 ZFP37Q9Y6Q3 630 aaPredicted RBP15.15■□□□□ 0.02
SAFB2-201ENST00000252542 TET1Q8NFU7 2136 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 PDAP1Q13442 181 aaKnown RBP15.14■□□□□ 0.01
SAFB2-201ENST00000252542 LSM12Q3MHD2 195 aaKnown RBP15.14■□□□□ 0.01
SAFB2-201ENST00000252542 CCDC153Q494R4 210 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 PITRM1Q5JRX3 1037 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 PM20D1Q6GTS8 502 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 ARHGAP22Q7Z5H3 698 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 ST13P4Q8IZP2 240 aaPredicted RBP15.14■□□□□ 0.01
SAFB2-201ENST00000252542 SH3RF2Q8TEC5 729 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 LINC01599Q8WXQ3 324 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 CENPKQ9BS16 269 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 EBF3Q9H4W6 596 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 ENTPD7Q9NQZ7 604 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 EIF2B3Q9NR50 452 aaKnown RBP15.14■□□□□ 0.01
SAFB2-201ENST00000252542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.14■□□□□ 0.01
SAFB2-201ENST00000252542 PDP2Q9P2J9 529 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 BIRC5O15392 142 aa15.14■□□□□ 0.01
SAFB2-201ENST00000252542 ALDH1A2O94788 518 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms