RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CASS4Q9NQ75 786 aa19.1■□□□□ 0.65
SNX4-201ENST00000251775 DUS2Q9NX74 493 aaKnown RBP19.1■□□□□ 0.65
SNX4-201ENST00000251775 MAGED2Q9UNF1 606 aaPredicted RBP19.1■□□□□ 0.65
SNX4-201ENST00000251775 HTRA2O43464 458 aaPredicted RBP19.09■□□□□ 0.65
SNX4-201ENST00000251775 PSMD8P48556 350 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 NAGLUP54802 743 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 HMBOX1Q6NT76 420 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 TMEM135Q86UB9 458 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 GPR180Q86V85 440 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 CLVS1Q8IUQ0 354 aaPredicted RBP19.09■□□□□ 0.65
SNX4-201ENST00000251775 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.09■□□□□ 0.65
SNX4-201ENST00000251775 GIPC3Q8TF64 312 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 APOL2Q9BQE5 337 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 VPS45Q9NRW7 570 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 VTI1BQ9UEU0 232 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 IPO11Q9UI26 975 aaKnown RBP19.09■□□□□ 0.65
SNX4-201ENST00000251775 SLC8A2Q9UPR5 921 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 Q9Y3F1 56 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 SNX13Q9Y5W8 968 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 RAD54BQ9Y620 910 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 ZCWPW2A0A1B0GU75 182 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 KANSL1LA0AUZ9 987 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 CASTOR2A6NHX0 329 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 KCNU1A8MYU2 1149 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 FAM155AB1AL88 458 aaPredicted RBP19.09■□□□□ 0.65
SNX4-201ENST00000251775 TAF2Q6P1X5 1199 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 GK5Q6ZS86 529 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 HERC6Q8IVU3 1022 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 DNAAF3Q8N9W5 541 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 HDAC11Q96DB2 347 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 BFARQ9NZS9 450 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 CDH9Q9ULB4 789 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 PTCH2Q9Y6C5 1203 aa19.09■□□□□ 0.65
SNX4-201ENST00000251775 E7ENX8 843 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 NCAM2O15394 837 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 CTSHP09668 335 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 HSPA1AP0DMV8 641 aaKnown RBP19.08■□□□□ 0.65
SNX4-201ENST00000251775 HSPA1BP0DMV9 641 aaKnown RBP19.08■□□□□ 0.65
SNX4-201ENST00000251775 NFKB1P19838 968 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 SCNN1GP51170 649 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 NAA20P61599 178 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 GALNT2Q10471 571 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 ARL13BQ3SXY8 428 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 TIGD5Q53EQ6 642 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 NHSL2Q5HYW2 709 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 CERCAMQ5T4B2 595 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 GPR141Q7Z602 305 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 C12orf43Q96C57 262 aaKnown RBP19.08■□□□□ 0.65
SNX4-201ENST00000251775 MFSD3Q96ES6 412 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 UHRF1Q96T88 793 aaPredicted RBP19.08■□□□□ 0.65
SNX4-201ENST00000251775 TKTL2Q9H0I9 626 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 GBA3Q9H227 469 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 TASP1Q9H6P5 420 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 WDCPQ9H6R7 721 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 UTP6Q9NYH9 597 aaKnown RBP19.08■□□□□ 0.65
SNX4-201ENST00000251775 MID2Q9UJV3 735 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 TRPV2Q9Y5S1 764 aa19.08■□□□□ 0.65
SNX4-201ENST00000251775 TANC1Q9C0D5 1861 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 ARL5CA6NH57 179 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 SLCO1B7G3V0H7 640 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 TFPTP0C1Z6 253 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 CXCR3P49682 368 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 PGGT1BP53609 377 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 PFKPQ01813 784 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 AGMOQ6ZNB7 445 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 FAM47BQ8NA70 645 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 RTP3Q9BQQ7 232 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 DCUN1D5Q9BTE7 237 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 C1QTNF1Q9BXJ1 281 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 NOL11Q9H8H0 719 aaKnown RBP19.08■□□□□ 0.64
SNX4-201ENST00000251775 OR12D3Q9UGF7 316 aa19.08■□□□□ 0.64
SNX4-201ENST00000251775 TRIM64CA6NLI5 447 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 LRIG2O94898 1065 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 PORP16435 677 aaPredicted RBP19.07■□□□□ 0.64
SNX4-201ENST00000251775 PHEXP78562 749 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 RDH11Q8TC12 318 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 RSPH1Q8WYR4 309 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 LPGAT1Q92604 370 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 TOP1MTQ969P6 601 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 MYLPFQ96A32 169 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 SMARCD1Q96GM5 515 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 MCMBPQ9BTE3 642 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 PAIP2BQ9ULR5 123 aaKnown RBP19.07■□□□□ 0.64
SNX4-201ENST00000251775 TCRBV3S1A0A5B6 114 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 TMEM233B4DJY2 109 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 TMX2-CTNND1H3BSU7 103 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 M0QZ92 97 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 TRIM24O15164 1050 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 FOXD2O60548 495 aaPredicted RBP19.07■□□□□ 0.64
SNX4-201ENST00000251775 CABYRO75952 493 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 APOA4P06727 396 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 CKMT2P17540 419 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 SLC7A1P30825 629 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 CSRP3P50461 194 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 ZBED5Q49AG3 693 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 INTS6LQ5JSJ4 861 aaKnown RBP19.07■□□□□ 0.64
SNX4-201ENST00000251775 CPNE9Q8IYJ1 553 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 VPS39Q96JC1 886 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 INIPQ9NRY2 104 aa19.07■□□□□ 0.64
SNX4-201ENST00000251775 UBP1Q9NZI7 540 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms