RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 CILP2Q8IUL8 1156 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 AGR3Q8TD06 166 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 WDR60Q8WVS4 1066 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 HDAC10Q969S8 669 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 IFT43Q96FT9 208 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 MRPL57Q9BQC6 102 aaKnown RBP25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 UNKQ9C0B0 810 aaKnown RBP25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 NACA2Q9H009 215 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 MAGEH1Q9H213 219 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 HIPK3Q9H422 1215 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 IGSF5Q9NSI5 407 aa25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 ZFP37Q9Y6Q3 630 aaPredicted RBP25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 SEC23IPQ9Y6Y8 1000 aaKnown RBP25.36■■□□□ 1.65
TMEM55B-201ENST00000250489 H0Y3Z8 333 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 MATN2O00339 956 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 HLA-DPA1P20036 260 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 SLC11A2P49281 568 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 RPL14P50914 215 aaKnown RBP25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 KPNA2P52292 529 aaKnown RBP25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 HK2P52789 917 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 GNA12Q03113 381 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 ALG1LQ6GMV1 187 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 OR7D4Q8NG98 312 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 RETREG1Q9H6L5 497 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 KCTD3Q9Y597 815 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 BPTFQ12830 3046 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 CHD5Q8TDI0 1954 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 H3BNC9 293 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 CCL22O00626 93 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 TM7SF2O76062 418 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 UPP2O95045 317 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 FGF1P05230 155 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 NCF2P19878 526 aaPredicted RBP25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 CPOXP36551 454 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 MXRA7P84157 204 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 PRKAA1Q13131 559 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 BTG3Q14201 252 aaPredicted RBP25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 HECTD3Q5T447 861 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 KLHDC10Q6PID8 442 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 LSMEM2Q8N112 164 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 OR52K2Q8NGK3 314 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 OR6P1Q8NGX9 317 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 FAM161BQ96MY7 647 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 CWH43Q9H720 699 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 MAN1C1Q9NR34 630 aa25.35■■□□□ 1.65
TMEM55B-201ENST00000250489 MEI4A8MW99 385 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 COCHO43405 550 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 SEC24AO95486 1093 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 EPOP01588 193 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 HMGA1P17096 107 aaKnown RBP25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 CDH4P55283 916 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 PRAMEP78395 509 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 ACVR1Q04771 509 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 ASPHQ12797 758 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 SLC14A2Q15849 920 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 DEFB128Q7Z7B8 93 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 SCUBE1Q8IWY4 988 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 LMNTD2Q8IXW0 634 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 PNPLA1Q8N8W4 532 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 KCNV2Q8TDN2 545 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 TACO1Q9BSH4 297 aaKnown RBP25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 PPP1R12CQ9BZL4 782 aa25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 AFF4Q9UHB7 1163 aaKnown RBP25.34■■□□□ 1.65
TMEM55B-201ENST00000250489 HDAC3O15379 428 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 MYCP01106 439 aaPredicted RBP25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 HECTD2Q5U5R9 776 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 METTL21CQ5VZV1 264 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 TLDC1Q6P9B6 456 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 DENND1CQ8IV53 801 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 POU5F2Q8N7G0 328 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 TSPAN17Q96FV3 270 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 IGSF21Q96ID5 467 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 PRICKLE1Q96MT3 831 aaPredicted RBP25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 DEFB118Q96PH6 123 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 OR52B2Q96RD2 323 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 CLSTN3Q9BQT9 956 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 PAK6Q9NQU5 681 aaPredicted RBP25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 MARCH4Q9P2E8 410 aaPredicted RBP25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 TRIM17Q9Y577 477 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 ACTL7AQ9Y615 435 aa25.33■■□□□ 1.65
TMEM55B-201ENST00000250489 S1PR4O95977 384 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 COPAP53621 1224 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 RPS24P62847 133 aaKnown RBP25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 CSHL1Q14406 222 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 FSCBQ5H9T9 825 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 ULK2Q8IYT8 1036 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 PHTF2Q8N3S3 785 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 TXNDC5Q8NBS9 432 aaKnown RBP25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 PDCD6IPQ8WUM4 868 aaKnown RBP25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 PLD4Q96BZ4 506 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 MGME1Q9BQP7 344 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 THTPAQ9BU02 230 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 TCF7L2Q9NQB0 619 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 ZDHHC2Q9UIJ5 367 aa25.33■■□□□ 1.64
TMEM55B-201ENST00000250489 OR51F1A6NGY5 319 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 E9PBE3 544 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 GRID2O43424 1007 aa25.32■■□□□ 1.64
TMEM55B-201ENST00000250489 ZBTB14O43829 449 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms