RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 LYPLA1O75608 230 aaPredicted RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 SNUPNO95149 360 aaKnown RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 NDST3O95803 873 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 HOXB8P17481 243 aaPredicted RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 SLC8A1P32418 973 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 EPHB3P54753 998 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 SLC12A2P55011 1212 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 RPS24P62847 133 aaKnown RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 ITIH5Q86UX2 942 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 ALYREFQ86V81 257 aaKnown RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 CILP2Q8IUL8 1156 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 OR7D4Q8NG98 312 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 BRSK1Q8TDC3 778 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 STON2Q8WXE9 905 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 UTP4Q969X6 686 aaKnown RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 ELMO2Q96JJ3 720 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 CINPQ9BW66 212 aaPredicted RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 NOD2Q9HC29 1040 aa23.05■■□□□ 1.28
HOXD9-201ENST00000249499 CORO1CQ9ULV4 474 aaPredicted RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 RUVBL2Q9Y230 463 aaKnown RBP23.05■■□□□ 1.28
HOXD9-201ENST00000249499 E2F8A0AVK6 867 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 C2orf71A6NGG8 1288 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 TARM1B6A8C7 271 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 PRRG1O14668 218 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 EN2P19622 333 aaPredicted RBP23.04■■□□□ 1.28
HOXD9-201ENST00000249499 NSUN2Q08J23 767 aaKnown RBP eCLIP23.04■■□□□ 1.28
HOXD9-201ENST00000249499 LRRC8EQ6NSJ5 796 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 DNAJB7Q7Z6W7 309 aaPredicted RBP23.04■■□□□ 1.28
HOXD9-201ENST00000249499 MFSD6LQ8IWD5 586 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 SCG3Q8WXD2 468 aaKnown RBP23.04■■□□□ 1.28
HOXD9-201ENST00000249499 TRIB3Q96RU7 358 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 BTBD10Q9BSF8 475 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 TMEM106CQ9BVX2 250 aa23.04■■□□□ 1.28
HOXD9-201ENST00000249499 ESRRAP11474 423 aaPredicted RBP23.03■■□□□ 1.28
HOXD9-201ENST00000249499 GMPRP36959 345 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 TAS2R39P59534 338 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 PRAMEP78395 509 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 TWF1Q12792 350 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 PABPC1LQ4VXU2 614 aaKnown RBP23.03■■□□□ 1.28
HOXD9-201ENST00000249499 GPR150Q8NGU9 434 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 RILPQ96NA2 401 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 GPR78Q96P69 363 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 RNF38Q9H0F5 515 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.03■■□□□ 1.28
HOXD9-201ENST00000249499 APOBEC2Q9Y235 224 aaKnown RBP23.03■■□□□ 1.28
HOXD9-201ENST00000249499 STK38LQ9Y2H1 464 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 INSL5Q9Y5Q6 135 aa23.03■■□□□ 1.28
HOXD9-201ENST00000249499 HSPA4LO95757 839 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 CR2P20023 1033 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 SAT1P21673 171 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 SLC26A3P40879 764 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 CEP97Q8IW35 865 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 FSTL5Q8N475 847 aaPredicted RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 OR52K2Q8NGK3 314 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 KCTD4Q8WVF5 259 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 OMDQ99983 421 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 MRPL57Q9BQC6 102 aaKnown RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 MRPL17Q9NRX2 175 aaKnown RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 GKN1Q9NS71 199 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 BAIAP2L1Q9UHR4 511 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 SSX2IPQ9Y2D8 614 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 ASB3Q9Y575 518 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 TNRC18O15417 2968 aaPredicted RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 OLFM2O95897 454 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 TIMP1P01033 207 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 SBK3P0C264 359 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 GJA8P48165 433 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 WDR5P61964 334 aaKnown RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 TUBB3Q13509 450 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 CNSTQ6PJW8 725 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 TTC7BQ86TV6 843 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 GPATCH11Q8N954 259 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 CCDC106Q9BWC9 280 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 GATA5Q9BWX5 397 aaPredicted RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 DRC3Q9H069 523 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 CDH19Q9H159 772 aa23.02■■□□□ 1.28
HOXD9-201ENST00000249499 MRPL46Q9H2W6 279 aaKnown RBP23.02■■□□□ 1.28
HOXD9-201ENST00000249499 C2orf78A6NCI8 922 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 ZNF195O14628 629 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 INSIG1O15503 277 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 BAIAP3O94812 1187 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 ARRB2P32121 409 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 SERPINB5P36952 375 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 DEFB103AP81534 67 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 TTC8Q8TAM2 541 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 DIS3LQ8TF46 1054 aaKnown RBP23.01■■□□□ 1.27
HOXD9-201ENST00000249499 PDCD6IPQ8WUM4 868 aaKnown RBP23.01■■□□□ 1.27
HOXD9-201ENST00000249499 HDAC10Q969S8 669 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 PRR11Q96HE9 360 aaPredicted RBP23.01■■□□□ 1.27
HOXD9-201ENST00000249499 SCYL1Q96KG9 808 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 SPON2Q9BUD6 331 aa23.01■■□□□ 1.27
HOXD9-201ENST00000249499 TTC24A2A3L6 582 aaPredicted RBP23■■□□□ 1.27
HOXD9-201ENST00000249499 TK2O00142 265 aa23■■□□□ 1.27
HOXD9-201ENST00000249499 RPP40O75818 363 aaKnown RBP23■■□□□ 1.27
HOXD9-201ENST00000249499 F11P03951 625 aa23■■□□□ 1.27
HOXD9-201ENST00000249499 AOC1P19801 751 aa23■■□□□ 1.27
HOXD9-201ENST00000249499 PSMA3P25788 255 aa23■■□□□ 1.27
HOXD9-201ENST00000249499 AVPR1AP37288 418 aa23■■□□□ 1.27
HOXD9-201ENST00000249499 FAM83EQ2M2I3 478 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms