RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MRPS21P82921 87 aaKnown RBP13.05□□□□□ -0.32
LSM8-201ENST00000249299 PDE1BQ01064 536 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 PRKCQQ04759 706 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 ZP2Q05996 745 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 KDSRQ06136 332 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 ZNF234Q14588 700 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 IHHQ14623 411 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 CASP8Q14790 479 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 BBS9Q3SYG4 887 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 PCID2Q5JVF3 399 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 DSG4Q86SJ6 1040 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 TMEM135Q86UB9 458 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 ZBED8Q8IZ13 594 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 IQCKQ8N0W5 287 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 TMIEQ8NEW7 156 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 CYB5D2Q8WUJ1 264 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 PTPRN2Q92932 1015 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 TM6SF2Q9BZW4 377 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 CDC42EP4Q9H3Q1 356 aaKnown RBP13.05□□□□□ -0.32
LSM8-201ENST00000249299 SUV39H2Q9H5I1 410 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 SAMD15Q9P1V8 674 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 FETUBQ9UGM5 382 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 SORCS3Q9UPU3 1222 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 TSPAN11A1L157 253 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 ANKRD66B4E2M5 251 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 MAP2K7O14733 419 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 RIPK2O43353 540 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 TCEA3O75764 348 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 USP1O94782 785 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 PGLSO95336 258 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 CPP00450 1065 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 PRLP01236 227 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 POLBP06746 335 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 PGAM1P18669 254 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 PSMA3P25788 255 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 HSD17B3P37058 310 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 GRIA1P42261 906 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 KIR2DL1P43626 348 aaPredicted RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 MESP2Q0VG99 397 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 ILF2Q12905 390 aaKnown RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 SPARCL1Q14515 664 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 MSS51Q4VC12 460 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 FNDC3BQ53EP0 1204 aaKnown RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 SLC44A4Q53GD3 710 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 SIRPB2Q5JXA9 342 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 ATXN7L2Q5T6C5 722 aaPredicted RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 STEAP4Q687X5 459 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 DENND2CQ68D51 928 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 LRIG3Q6UXM1 1119 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 SERPINA13PQ6UXR4 307 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 DPY19L3Q6ZPD9 716 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 Q6ZVU0 165 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 PALM2Q8IXS6 379 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 RAVER1Q8IY67 606 aaKnown RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 UBALD2Q8IYN6 164 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 SYNPOQ8N3V7 929 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 FBXO36Q8NEA4 188 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 ST13P5Q8NFI4 369 aaPredicted RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 BRSK1Q8TDC3 778 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 STAMBPL1Q96FJ0 436 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 SHDQ96IW2 340 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 EXOC2Q96KP1 924 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 LYSMD1Q96S90 227 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 CCDC77Q9BR77 488 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 ACBD3Q9H3P7 528 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 MAGEE1Q9HCI5 957 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 WNT16Q9UBV4 365 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 ZC3H7BQ9UGR2 993 aaKnown RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 EVLQ9UI08 416 aaPredicted RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 PHTF1Q9UMS5 762 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
LSM8-201ENST00000249299 MRPS17Q9Y2R5 130 aaKnown RBP13.04□□□□□ -0.32
LSM8-201ENST00000249299 TTC34A8MYJ7 566 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 K7EQS6 105 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 AVILO75366 819 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 CRTAMO95727 393 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 ASGR2P07307 311 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 ELK3P41970 407 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 SESN2P58004 480 aaPredicted RBP13.03□□□□□ -0.32
LSM8-201ENST00000249299 TFF2Q03403 129 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 TRAF2Q12933 501 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 RASA2Q15283 850 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 PCSK7Q16549 785 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 SPANXN3Q5MJ09 141 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 C9orf64Q5T6V5 341 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 SDE2Q6IQ49 451 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 PKN3Q6P5Z2 889 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 GDPD4Q6W3E5 623 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 TTC8Q8TAM2 541 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 SORCS1Q8WY21 1168 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 OR8D1Q8WZ84 308 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 VOPP1Q96AW1 172 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 NELL2Q99435 816 aa13.03□□□□□ -0.32
LSM8-201ENST00000249299 GABRG3Q99928 467 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms