RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 NLGN3Q9NZ94 848 aa12.9□□□□□ -0.34
PDZD11-201ENST00000239666 TMEM63CQ9P1W3 806 aa12.9□□□□□ -0.34
PDZD11-201ENST00000239666 AP4E1Q9UPM8 1137 aa12.9□□□□□ -0.34
PDZD11-201ENST00000239666 USP24Q9UPU5 2620 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 SPTY2D1-AS1A0A0U1RR47 76 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 TMEM191CA6NGB0 347 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 J3QL48 77 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 TPP1O14773 563 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 WNT9AO14904 365 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 SCAMP1O15126 338 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 TMCC1O94876 653 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 CD160O95971 181 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 UGT2B4P06133 528 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 DGKAP23743 735 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 HTR1BP28222 390 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 ARL4AP40617 200 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 PEX5P50542 639 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 METAP1P53582 386 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 BNIP3Q12983 259 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 NR1I3Q14994 352 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 SHBQ15464 509 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 KLHL40Q2TBA0 621 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 SKOR2Q2VWA4 1001 aaPredicted RBP12.89□□□□□ -0.35
PDZD11-201ENST00000239666 PRAMEF14Q5SWL7 426 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 PARS2Q7L3T8 475 aaKnown RBP12.89□□□□□ -0.35
PDZD11-201ENST00000239666 PTAR1Q7Z6K3 402 aaPredicted RBP12.89□□□□□ -0.35
PDZD11-201ENST00000239666 LRRC49Q8IUZ0 686 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 FAM181AQ8N9Y4 354 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 WDR48Q8TAF3 677 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 NSMCE1Q8WV22 266 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 SCG3Q8WXD2 468 aaKnown RBP12.89□□□□□ -0.35
PDZD11-201ENST00000239666 KLHL32Q96NJ5 620 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 ZNF599Q96NL3 588 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 ANP32EQ9BTT0 268 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 NRSN2Q9GZP1 204 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 DHX35Q9H5Z1 703 aaKnown RBP12.89□□□□□ -0.35
PDZD11-201ENST00000239666 ATP13A3Q9H7F0 1226 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 NDFIP2Q9NV92 336 aa12.89□□□□□ -0.35
PDZD11-201ENST00000239666 CNOT8Q9UFF9 292 aaKnown RBP12.89□□□□□ -0.35
PDZD11-201ENST00000239666 TRABD2BA6NFA1 517 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 TEX33O43247 280 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 PIAS2O75928 621 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 CSF2P04141 144 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 KRT10P13645 584 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 PRLRP16471 622 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 SERPINA4P29622 427 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 SERPINB6P35237 376 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 HSPA9P38646 679 aaKnown RBP12.88□□□□□ -0.35
PDZD11-201ENST00000239666 ACADVLP49748 655 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 CCDC157Q569K6 752 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 ARTNQ5T4W7 220 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
PDZD11-201ENST00000239666 DHRS13Q6UX07 377 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 LSMEM2Q8N112 164 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 PAF1Q8N7H5 531 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 OR13H1Q8NG92 308 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 RFFLQ8WZ73 363 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 SYT11Q9BT88 431 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 ABCG4Q9H172 646 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 ISCUQ9H1K1 167 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 SUV39H2Q9H5I1 410 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 DNAJC28Q9NX36 388 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 SPASTQ9UBP0 616 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
PDZD11-201ENST00000239666 ZFR2Q9UPR6 939 aaKnown RBP12.88□□□□□ -0.35
PDZD11-201ENST00000239666 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
PDZD11-201ENST00000239666 GOLGA4Q13439 2230 aaKnown RBP12.88□□□□□ -0.35
PDZD11-201ENST00000239666 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.87□□□□□ -0.35
PDZD11-201ENST00000239666 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 TMCO5BA8MYB1 307 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 ESPNB1AK53 854 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 H3BRJ5 948 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 AREL1O15033 823 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 PRAMEF11O60813 436 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 PALMO75781 387 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 SERPING1P05155 500 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 CKMT1AP12532 417 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 NME1P15531 152 aaKnown RBP12.87□□□□□ -0.35
PDZD11-201ENST00000239666 UBASH3AP57075 661 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 IL10RBQ08334 325 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
PDZD11-201ENST00000239666 HADHQ16836 314 aaKnown RBP12.87□□□□□ -0.35
PDZD11-201ENST00000239666 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 TDRD12Q587J7 1177 aaKnown RBP12.87□□□□□ -0.35
PDZD11-201ENST00000239666 RALGPS1Q5JS13 557 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 SEL1L3Q68CR1 1132 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 GCNT7Q6ZNI0 430 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 RFX8Q6ZV50 586 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 KANSL1Q7Z3B3 1105 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 NDUFAF2Q8N183 169 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 KLK6Q92876 244 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 ZNF653Q96CK0 615 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 HMCESQ96FZ2 354 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 BMFQ96LC9 184 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 IL12RB2Q99665 862 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 SLC13A1Q9BZW2 595 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 LRRC19Q9H756 370 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 SP110Q9HB58 689 aa12.87□□□□□ -0.35
PDZD11-201ENST00000239666 GPR27Q9NS67 375 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms