RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 PTGES3Q15185 160 aaKnown RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 ZNF549Q6P9A3 640 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 METTL7BQ6UX53 244 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 CXCL17Q6UXB2 119 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 SLC26A11Q86WA9 606 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 ARMC10Q8N2F6 343 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 ATP8B4Q8TF62 1192 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 NYAP2Q9P242 653 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RECQL4O94761 1208 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 ARFIP1P53367 373 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 NEK5Q6P3R8 708 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 STOX1Q6ZVD7 989 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 HELQQ8TDG4 1101 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 DNASE1L2Q92874 299 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RPS6KA6Q9UK32 745 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 ELK3P41970 407 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 MCCD1P59942 119 aaPredicted RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 FOXM1Q08050 763 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 CHAF1BQ13112 559 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 ZNF730Q6ZMV8 503 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 COX4I2Q96KJ9 171 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 C5orf34Q96MH7 638 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 Q96MT0 163 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 MYRFQ9Y2G1 1151 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RPLP2P05387 115 aaKnown RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 NOS2P35228 1153 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 MTA1Q13330 715 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 SWI5Q1ZZU3 235 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 TCP10LQ8TDR4 215 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 SOCS4Q8WXH5 440 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RNF121Q9H920 327 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 CIDEBQ9UHD4 219 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 GMFBP60983 142 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 CBX2Q14781 532 aaPredicted RBP13.29□□□□□ -0.28
NEK9-201ENST00000238616 SNX20Q7Z614 316 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 TXNRD3Q86VQ6 643 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 SPATA6LQ8N4H0 392 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 OR7A2PQ8NGA2 310 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 RXFP1Q9HBX9 757 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 ABCC13Q9NSE7 274 aa13.29□□□□□ -0.28
NEK9-201ENST00000238616 CPSF4LA6NMK7 179 aaKnown RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 IRF8Q02556 426 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 ZFP28Q8NHY6 868 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 HAVCR1Q96D42 359 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 ZNF318Q5VUA4 2279 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 DDX3XO00571 662 aaKnown RBP eCLIP13.28□□□□□ -0.282e-12■■■□□ 15.8
NEK9-201ENST00000238616 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 PSMB4P28070 264 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 IL12BP29460 328 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 WASP42768 502 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 IRAK1P51617 712 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 CDKL1Q00532 357 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 NR1D2Q14995 579 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 VPS72Q15906 364 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 WRAP53Q9BUR4 548 aaKnown RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 PGAM1P18669 254 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 ADRM1Q16186 407 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 RTL4Q6ZR62 310 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 TMPRSS11BQ86T26 416 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 CHERPQ8IWX8 916 aaKnown RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 ZNF540Q8NDQ6 660 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 PNPT1Q8TCS8 783 aaKnown RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 UBE2E3Q969T4 207 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 MOCS1Q9NZB8 636 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 SEPT4O43236 478 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 CAMTA2O94983 1202 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 ADH1CP00326 375 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 FDPSP14324 419 aaKnown RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 CYP11B2P19099 503 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 GDI2P50395 445 aaKnown RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 HERVK_113P62684 666 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 KCNA10Q16322 511 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 MAPKAPK3Q16644 382 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 KCT2Q8NC54 265 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 KAT2AQ92830 837 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 FBXO6Q9NRD1 293 aaPredicted RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 MYO3AQ8NEV4 1616 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 CXCL14O95715 111 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 FTH1P02794 183 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 ZNF806P0C7X5 589 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 LINC00032P0C843 101 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 IL18Q14116 193 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 RFX7Q2KHR2 1363 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 INTS11Q5TA45 600 aaKnown RBP13.28□□□□□ -0.28
NEK9-201ENST00000238616 SLC30A6Q6NXT4 461 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 TAS1R2Q8TE23 839 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 NELL1Q92832 810 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 MAGEC1O60732 1142 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 TNFAIP8O95379 198 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 PROCP04070 461 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 PSMD8P48556 350 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 ACVR2BQ13705 512 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 PTCHD4Q6ZW05 846 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 LPPQ93052 612 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 TMEM216Q9P0N5 145 aa13.28□□□□□ -0.28
NEK9-201ENST00000238616 IKZF2Q9UKS7 526 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms