RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 GPR158Q5T848 1215 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 NXNQ6DKJ4 435 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 PAF1Q8N7H5 531 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 LRRC3Q9BY71 257 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 XAB2Q9HCS7 855 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 DNAJC16Q9Y2G8 782 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 LTBP2Q14767 1821 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 DOCK4Q8N1I0 1966 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 EPOPA6NHQ4 379 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 PHGDHO43175 533 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 GREM1O60565 184 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 EFCAB14O75071 495 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 POLBP06746 335 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 MAGEA10P43363 369 aaPredicted RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 ZNF460Q14592 562 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 MZB1Q8WU39 189 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 MRPS31Q92665 395 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 ZFYVE19Q96K21 471 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 TBL1YQ9BQ87 522 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 THTPAQ9BU02 230 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 ZDHHC4Q9NPG8 344 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 SMAD6O43541 496 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 CLCN4P51793 760 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 LBRQ14739 615 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 FAM219BQ5XKK7 198 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 ATG16L1Q676U5 607 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 SHKBP1Q8TBC3 707 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 STMN2Q93045 179 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 TMA16Q96EY4 203 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 TSGA13Q96PP4 275 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 NKX1-2Q9UD57 310 aaPredicted RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 PLLPQ9Y342 182 aa13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 HBS1LQ9Y450 684 aaKnown RBP13.12□□□□□ -0.31
PCDHB6-201ENST00000231136 PLXNA3P51805 1871 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 GPR39O43194 453 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 ITM2AO43736 263 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 CSKP41240 450 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 CTSOP43234 321 aaPredicted RBP13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 RING1Q06587 406 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 ANKRD20A4Q4UJ75 823 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 ITPRIPL1Q6GPH6 555 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 CXorf57Q6NSI4 855 aaKnown RBP13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 PSRC1Q6PGN9 363 aaPredicted RBP13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 FAM13CQ8NE31 585 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 ITFG1Q8TB96 612 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 BLOC1S5Q8TDH9 187 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 CASS4Q9NQ75 786 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 KIAA1671Q9BY89 1806 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 ZCWPW2A0A1B0GU75 182 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 SKAP2O75563 359 aaPredicted RBP13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 RFPL1O75677 317 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 RHOP08100 348 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 CALRP27797 417 aaKnown RBP13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 STK19P49842 368 aaPredicted RBP13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 MPP1Q00013 466 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 USP4Q13107 963 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 ZNF235Q14590 738 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 GALNTL6Q49A17 601 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 ZNF789Q5FWF6 425 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 LRRC73Q5JTD7 316 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 TMEM25Q86YD3 366 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 LZTR1Q8N653 840 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 CCNYL1Q8N7R7 359 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 PDZD8Q8NEN9 1154 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 SH3RF2Q8TEC5 729 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 HERVK_113Q902F9 699 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 C20orf27Q9GZN8 174 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 NOP53Q9NZM5 478 aaKnown RBP13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 VPS28Q9UK41 221 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 TRHDEQ9UKU6 1024 aa13.11□□□□□ -0.31
PCDHB6-201ENST00000231136 SPAG6O75602 509 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 PRPSAP1Q14558 356 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 TAF11Q15544 211 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 ARRDC2Q8TBH0 407 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 SORCS1Q8WY21 1168 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 MIEF2Q96C03 454 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 RSRC1Q96IZ7 334 aaKnown RBP13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 TTC1Q99614 292 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 ASAH2Q9NR71 780 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 PNPOQ9NVS9 261 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 MOCS1Q9NZB8 636 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 ARL5AQ9Y689 179 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 INSIG1O15503 277 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 T-ENOLP0DO92 83 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 CD70P32970 193 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 PGM1P36871 562 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 C10orf107Q8IVU9 208 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 UTP4Q969X6 686 aaKnown RBP13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 LRRC3BQ96PB8 259 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 ARHGEF3Q9NR81 526 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 WNT6Q9Y6F9 365 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 LEFTY2O00292 366 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 MOSPD3O75425 235 aa13.1□□□□□ -0.31
PCDHB6-201ENST00000231136 ITGA2BP08514 1039 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms