RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MYF5P13349 255 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 CKMT2P17540 419 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 SERPINA4P29622 427 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 HNRNPH3P31942 346 aaKnown RBP14.35□□□□□ -0.11
GPN3-201ENST00000228827 CSNK1DP48730 415 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 PFN3P60673 137 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 HNRNPKP61978 463 aaKnown RBP eCLIP14.35□□□□□ -0.11
GPN3-201ENST00000228827 BCL2L1Q07817 233 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 SLC10A7Q0GE19 358 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 MMRN1Q13201 1228 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 ZNF235Q14590 738 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 SMAD1Q15797 465 aaKnown RBP14.35□□□□□ -0.11
GPN3-201ENST00000228827 PROX2Q3B8N5 592 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 ATP13A4Q4VNC1 1196 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 TMCO4Q5TGY1 634 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 ERAP2Q6P179 960 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 PARGQ86W56 976 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 ATPAF2Q8N5M1 289 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 TP53I13Q8NBR0 393 aaPredicted RBP14.35□□□□□ -0.11
GPN3-201ENST00000228827 OR8K1Q8NGG5 319 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 OR4C6Q8NH72 309 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 HCAR2Q8TDS4 363 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 IFT43Q96FT9 208 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 ZNF641Q96N77 438 aaPredicted RBP14.35□□□□□ -0.11
GPN3-201ENST00000228827 DNAJC7Q99615 494 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 SEPT3Q9UH03 358 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 KLF15Q9UIH9 416 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 PCDHGA1Q9Y5H4 931 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 PCNX2A6NKB5 2137 aa14.35□□□□□ -0.11
GPN3-201ENST00000228827 RIOK3O14730 519 aaKnown RBP14.34□□□□□ -0.11
GPN3-201ENST00000228827 CSF2P04141 144 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 C6P13671 934 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 LIG3P49916 1009 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 RENBPP51606 427 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 DAB2P98082 770 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 EIF2B5Q13144 721 aaKnown RBP14.34□□□□□ -0.11
GPN3-201ENST00000228827 ZNF211Q13398 564 aaPredicted RBP14.34□□□□□ -0.11
GPN3-201ENST00000228827 TRIM14Q14142 442 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 IRF4Q15306 451 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 SLC18A3Q16572 532 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 HADHQ16836 314 aaKnown RBP14.34□□□□□ -0.11
GPN3-201ENST00000228827 BRAT1Q6PJG6 821 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 VSTM4Q8IW00 320 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 MDM1Q8TC05 714 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 CTNNBL1Q8WYA6 563 aaPredicted RBP14.34□□□□□ -0.11
GPN3-201ENST00000228827 NSMCE3Q96MG7 304 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 ZNF599Q96NL3 588 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 C1QTNF7Q9BXJ2 289 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 ZNHIT6Q9NWK9 470 aaKnown RBP14.34□□□□□ -0.11
GPN3-201ENST00000228827 ATP8A1Q9Y2Q0 1164 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 EPG5Q9HCE0 2579 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 CHD5Q8TDI0 1954 aa14.34□□□□□ -0.11
GPN3-201ENST00000228827 TPRP12270 2363 aaKnown RBP14.33□□□□□ -0.11
GPN3-201ENST00000228827 SRRM3A6NNA2 597 aaPredicted RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 TMEM110-MUSTN1A8MSY1 372 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 A8MX80 341 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 H3BM21 787 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 AKR1B10O60218 316 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 LZTS3O60299 673 aaPredicted RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 MAFKO60675 156 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 TPM1P09493 284 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 C1SP09871 688 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 H2AFZP0C0S5 128 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 GIMD1P0DJR0 217 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 ALPPL2P10696 532 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 JUPP14923 745 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 NME1P15531 152 aaKnown RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 JUNDP17535 347 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 IL4RP24394 825 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 MMP12P39900 470 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 SUOXP51687 545 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 THOP1P52888 689 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 ADKP55263 362 aaKnown RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 NSUN2Q08J23 767 aaKnown RBP eCLIP14.33□□□□□ -0.12
GPN3-201ENST00000228827 LRRC14Q15048 493 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 TSR1Q2NL82 804 aaKnown RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 H2AFVQ71UI9 128 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 RBFAQ8N0V3 343 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 PGBD5Q8N414 524 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 ZNF548Q8NEK5 533 aaPredicted RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 LMX1AQ8TE12 382 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 PSKH2Q96QS6 385 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 TCEAL2Q9H3H9 227 aaPredicted RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 CCDC86Q9H6F5 360 aaKnown RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 ABHD10Q9NUJ1 306 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 UVRAGQ9P2Y5 699 aa14.33□□□□□ -0.12
GPN3-201ENST00000228827 KMT2BQ9UMN6 2715 aaPredicted RBP14.33□□□□□ -0.12
GPN3-201ENST00000228827 TAF4O00268 1085 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 SCAMP1O15126 338 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 PROSCO94903 275 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 PEX11BO96011 259 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 CAPNS1P04632 268 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 PCCBP05166 539 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 SERPINB6P35237 376 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 TAS2R40P59535 323 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 MAXP61244 160 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 AP1S1P61966 158 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 PTK2BQ14289 1009 aa14.32□□□□□ -0.12
GPN3-201ENST00000228827 ASTE1Q2TB18 679 aaPredicted RBP14.32□□□□□ -0.12
GPN3-201ENST00000228827 WSCD2Q2TBF2 565 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms