RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 SYT12Q8IV01 421 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 UBE2Q2Q8WVN8 375 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 SNX19Q92543 992 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 TCEAL3Q969E4 200 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 QKIQ96PU8 341 aaKnown RBP eCLIP14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 POLR1EQ9GZS1 481 aaKnown RBP14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 PCED1AQ9H1Q7 454 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 KDM4CQ9H3R0 1056 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 USP29Q9HBJ7 922 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 FSCN3Q9NQT6 498 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 AMACRQ9UHK6 382 aa14.53□□□□□ -0.08
SUPT4H1-201ENST00000225504 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 A8MX80 341 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 HTRA2O43464 458 aaPredicted RBP14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 NEBLO76041 1014 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 PDHA1P08559 390 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 RBP3P10745 1247 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 CD68P34810 354 aaPredicted RBP14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 CCR5P51681 352 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 FGL2Q14314 439 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 SYCP2LQ5T4T6 812 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 DARS2Q6PI48 645 aaKnown RBP14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 PRPF39Q86UA1 669 aaKnown RBP14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 HCAR2Q8TDS4 363 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 PDCD6IPQ8WUM4 868 aaKnown RBP14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 HTR3CQ8WXA8 447 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 ATG4AQ8WYN0 398 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 TEKT5Q96M29 485 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 HINFPQ9BQA5 517 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 CARD9Q9H257 536 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 PCDH12Q9NPG4 1184 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 PCDHGA5Q9Y5G8 931 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 RAI2Q9Y5P3 530 aa14.52□□□□□ -0.08
SUPT4H1-201ENST00000225504 A0A0U1RQS6 177 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 IGLON5A6NGN9 336 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 HACD1B0YJ81 288 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 F5H423 210 aaPredicted RBP14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 LATO43561 262 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 AP1G1O43747 822 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 PRLP01236 227 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 ATP1A1P05023 1023 aaKnown RBP14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 CD27P26842 260 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 CD86P42081 329 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 MAPK8P45983 427 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 IRX4P78413 519 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 SKOR1P84550 965 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 CCDC15Q0P6D6 951 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 ZNF284Q2VY69 593 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 WDR45BQ5MNZ6 344 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 SEL1L2Q5TEA6 688 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 PEAR1Q5VY43 1037 aaPredicted RBP14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 ZNF567Q8N184 647 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 ZCCHC9Q8N567 271 aaKnown RBP14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 SPATA22Q8NHS9 363 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 RAB7BQ96AH8 199 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 FEM1CQ96JP0 617 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 RBM15Q96T37 977 aaKnown RBP eCLIP14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 GLOD4Q9HC38 313 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 PREBQ9HCU5 417 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 RXFP3Q9NSD7 469 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 SEMA4GQ9NTN9 838 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 CHKBQ9Y259 395 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 JRKLQ9Y4A0 524 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 PCDHB9Q9Y5E1 797 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 ZNF292O60281 2723 aa14.51□□□□□ -0.09
SUPT4H1-201ENST00000225504 A0A1W2PPC4 97 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 UPK3BL1B0FP48 263 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 UPK3BL2E5RIL1 263 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 RIOK3O14730 519 aaKnown RBP14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 SLC31A1O15431 190 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 KIF5CO60282 957 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 CEP104O60308 925 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 MMP20O60882 483 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 ZNF806P0C7X5 589 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 PRLRP16471 622 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 CES1P23141 567 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 SIX1Q15475 284 aaPredicted RBP14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 TMEM259Q4ZIN3 620 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 RALGPS1Q5JS13 557 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 CFAP58Q5T655 872 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 NEK5Q6P3R8 708 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 BRAT1Q6PJG6 821 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 PID1Q7Z2X4 250 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 TRIM69Q86WT6 500 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 HORMAD1Q86X24 394 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 SLC35B2Q8TB61 432 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 PIH1D2Q8WWB5 315 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 C1orf54Q8WWF1 131 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 IMP4Q96G21 291 aaKnown RBP14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 WRAP53Q9BUR4 548 aaKnown RBP14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 UBP1Q9NZI7 540 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 DNPEPQ9ULA0 475 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 CA5BQ9Y2D0 317 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 PLXNA2O75051 1894 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 FAM186AA6NE01 2351 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 GOLGA6L9A6NEM1 432 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 NEMP1O14524 444 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 BCAT2O15382 392 aaPredicted RBP14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 TSPAN6O43657 245 aa14.5□□□□□ -0.09
SUPT4H1-201ENST00000225504 FZD6O60353 706 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms