RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 THADAQ6YHU6 1953 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SHROOM3Q8TF72 1996 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3DA0A087WVF3 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3IA0A087WXS9 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3EA0A087X179 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3KA0A087X1G2 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3FA6NER0 549 aaPredicted RBP10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3LB9A6J9 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 ALOX15BO15296 676 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 INSIG1O15503 277 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 GJB3O75712 270 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 UGT2B4P06133 528 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3HP0C7X1 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 RBP3P10745 1247 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 HSPA9P38646 679 aaKnown RBP10.7□□□□□ -0.7
MRPS35-201ENST00000081029 PTGER3P43115 390 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 VPS41P49754 854 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 MAXP61244 160 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 GALNT2Q10471 571 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 CNTN1Q12860 1018 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SFSWAPQ12872 951 aaKnown RBP10.7□□□□□ -0.7
MRPS35-201ENST00000081029 CCDC6Q16204 474 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TMCO4Q5TGY1 634 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3GQ6DHY5 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3CQ6IPX1 549 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SLC36A4Q6YBV0 504 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 ZC3H18Q86VM9 953 aaKnown RBP10.7□□□□□ -0.7
MRPS35-201ENST00000081029 RGL4Q8IZJ4 473 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TBC1D3Q8IZP1 549 aaPredicted RBP10.7□□□□□ -0.7
MRPS35-201ENST00000081029 BBS5Q8N3I7 341 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 MREGQ8N565 214 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 CCDC89Q8N998 374 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SUMF1Q8NBK3 374 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 TMIEQ8NEW7 156 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 FBXO25Q8TCJ0 367 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SNX19Q92543 992 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SNF8Q96H20 258 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 NT5MQ9NPB1 228 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 WSB2Q9NYS7 404 aaPredicted RBP10.7□□□□□ -0.7
MRPS35-201ENST00000081029 LHX3Q9UBR4 397 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SEPT3Q9UH03 358 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SCML1Q9UN30 329 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 WASF2Q9Y6W5 498 aa10.7□□□□□ -0.7
MRPS35-201ENST00000081029 SPAG17Q6Q759 2223 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 CXorf51AA0A1B0GTR3 108 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 KCNK1O00180 336 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 GSRP00390 522 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 MAOBP27338 520 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 MMP13P45452 471 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 RGRP47804 291 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 NR2C2P49116 596 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 RFTN1Q14699 578 aaPredicted RBP10.69□□□□□ -0.7
MRPS35-201ENST00000081029 TIGD7Q6NT04 549 aaPredicted RBP10.69□□□□□ -0.7
MRPS35-201ENST00000081029 FBXL19Q6PCT2 694 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 DARS2Q6PI48 645 aaKnown RBP10.69□□□□□ -0.7
MRPS35-201ENST00000081029 ASCL5Q7RTU5 278 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 C11orf74Q86VG3 221 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 LRRC49Q8IUZ0 686 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 DCLK2Q8N568 766 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 PPP1R16AQ96I34 528 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 HSPA12BQ96MM6 686 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 KLHL32Q96NJ5 620 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 FMO2Q99518 471 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 TXLNGYQ9BZA5 131 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 FAM129AQ9BZQ8 928 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 MIR1-1HGQ9H1L0 117 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 ARRDC1-AS1Q9H2J1 176 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 USP29Q9HBJ7 922 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 RBM22Q9NW64 420 aaKnown RBP eCLIP10.69□□□□□ -0.7
MRPS35-201ENST00000081029 ANAPC5Q9UJX4 755 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 GMEB2Q9UKD1 530 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 DMDP11532 3685 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 FANCMQ8IYD8 2048 aa10.69□□□□□ -0.7
MRPS35-201ENST00000081029 EP300Q09472 2414 aaPredicted RBP10.69□□□□□ -0.7
MRPS35-201ENST00000081029 RIF1Q5UIP0 2472 aaKnown RBP10.68□□□□□ -0.7
MRPS35-201ENST00000081029 PTPRZ1P23471 2315 aaPredicted RBP10.68□□□□□ -0.7
MRPS35-201ENST00000081029 MEI4A8MW99 385 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 H7C0C1 242 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 MUSKO15146 869 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 MATN3O15232 486 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 FSBPO95073 299 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 PIGNO95427 931 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 SEMA4FO95754 770 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 CCNB1P14635 433 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 CCNCP24863 283 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 STIP1P31948 543 aaKnown RBP10.68□□□□□ -0.7
MRPS35-201ENST00000081029 DRD3P35462 400 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 ATP5OP48047 213 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 RENBPP51606 427 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 GDF10P55107 478 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 ZNF33AQ06730 810 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 CALCOCO2Q13137 446 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 PDK1Q15118 436 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 LRRC73Q5JTD7 316 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 CFAP58Q5T655 872 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 PMS2CLQ68D20 193 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 NCEH1Q6PIU2 408 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 GDPD4Q6W3E5 623 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 USP30Q70CQ3 517 aa10.68□□□□□ -0.7
MRPS35-201ENST00000081029 SRLQ86TD4 932 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms