RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 VWA5B1Q5TIE3 1220 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 METTL21CQ5VZV1 264 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 KLHDC10Q6PID8 442 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 CNSTQ6PJW8 725 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 EPGNQ6UW88 154 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 PIWIL4Q7Z3Z4 852 aaKnown RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 PTAR1Q7Z6K3 402 aaPredicted RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 CILP2Q8IUL8 1156 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 PGBD5Q8N414 524 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 OR13J1Q8NGT2 312 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 ARRDC2Q8TBH0 407 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 BLOC1S5Q8TDH9 187 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 PDCD6IPQ8WUM4 868 aaKnown RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF296Q8WUU4 475 aaPredicted RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 BCL7CQ8WUZ0 217 aaPredicted RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 PEX13Q92968 403 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 TADA1Q96BN2 335 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 NDNQ99608 321 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 THTPAQ9BU02 230 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 GPAMQ9HCL2 828 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 TRPM5Q9NZQ8 1165 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 UBA2Q9UBT2 640 aaPredicted RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 AFF4Q9UHB7 1163 aaKnown RBP8.32□□□□□ -1.08
VAMP3-201ENST00000054666 CDYLQ9Y232 598 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 TRIM17Q9Y577 477 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 BACE2Q9Y5Z0 518 aa8.32□□□□□ -1.08
VAMP3-201ENST00000054666 LOC285095A0A1B0GVY8 99 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 MROH6A6NGR9 719 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 E9PBE3 544 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF195O14628 629 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 NPHS1O60500 1241 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 KLHL41O60662 606 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CLDN11O75508 207 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 UPP2O95045 317 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 EPOP01588 193 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CHRNGP07510 517 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 RHOCP08134 193 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 RBP1P09455 135 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 LTA4HP09960 611 aaKnown RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ATXN1LP0C7T5 689 aaKnown RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 HOXB8P17481 243 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ATP5F1P24539 256 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 PRDX6P30041 224 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CCL23P55773 120 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 BTG3Q14201 252 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 RCN1Q15293 331 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ACCSLQ4AC99 568 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ARL13AQ5H913 290 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 RBM20Q5T481 1227 aaKnown RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 FAM45BPQ6NSW5 357 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 MRNIPQ6NTE8 343 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 TAS1R1Q7RTX1 841 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 NET1Q7Z628 596 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 DEFB128Q7Z7B8 93 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 MFSD6LQ8IWD5 586 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ULK2Q8IYT8 1036 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CFAP52Q8N1V2 620 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CCNYL1Q8N7R7 359 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 FAM45AQ8TCE6 357 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 KCNV2Q8TDN2 545 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 HEXDCQ8WVB3 486 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 HDAC10Q969S8 669 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 OMDQ99983 421 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 DDX50Q9BQ39 737 aaKnown RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 PPP1R12CQ9BZL4 782 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 POMKQ9H5K3 350 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 PDFQ9HBH1 243 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 NKX1-2Q9UD57 310 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 MCM8Q9UJA3 840 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CORO1CQ9ULV4 474 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ZFP37Q9Y6Q3 630 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 SCN5AQ14524 2016 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 MICAL3Q7RTP6 2002 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 GOLGA8QA0A0J9YX86 632 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 A0A1B0GVM2 712 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 GOLGA8OA6NCC3 632 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ZNF840PA6NDX5 716 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 TCAF2A6NFQ2 919 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 F8W8V4 182 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 GOLGA8NF8WBI6 632 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 MATN2O00339 956 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 NEMP1O14524 444 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 DCXO43602 365 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 DLX3O60479 287 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 GLP2RO95838 553 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CXCL10P02778 98 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 RPL17P18621 184 aaKnown RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 CORO1AP31146 461 aaKnown RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 SLC6A4P31645 630 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ALDH1A3P47895 512 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 PGGT1BP53609 377 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 GALNT3Q14435 633 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 RFTN1Q14699 578 aaPredicted RBP8.31□□□□□ -1.08
VAMP3-201ENST00000054666 SLC14A2Q15849 920 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 TCTN1Q2MV58 587 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 C5orf22Q49AR2 442 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 SLC9B1Q4ZJI4 515 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 ACSBG2Q5FVE4 666 aa8.31□□□□□ -1.08
VAMP3-201ENST00000054666 TECRLQ5HYJ1 363 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms