RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 TBX4P57082 545 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 TBC1D25Q3MII6 688 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 ARTNQ5T4W7 220 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 SNX31Q8N9S9 440 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 DRAXINQ8NBI3 349 aaPredicted RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 OR6P1Q8NGX9 317 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 B4GALNT2Q8NHY0 566 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 NAT14Q8WUY8 206 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 LINC01599Q8WXQ3 324 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 IGSF8Q969P0 613 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 RCN3Q96D15 328 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 MYEOVQ96EZ4 313 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 DCUN1D1Q96GG9 259 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 C1QTNF1Q9BXJ1 281 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 GRIP2Q9C0E4 1043 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 UPF3AQ9H1J1 476 aaKnown RBP13.25□□□□□ -0.29
CTNS-201ENST00000046640 TBC1D13Q9NVG8 400 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 TCAF1Q9Y4C2 921 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 CDY1Q9Y6F8 540 aa13.25□□□□□ -0.29
CTNS-201ENST00000046640 KCNU1A8MYU2 1149 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 DLX3O60479 287 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 PYGLP06737 847 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 STMN1P16949 149 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 CHN2P52757 468 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 THOP1P52888 689 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 MGAT5BQ3V5L5 792 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 CTXN3Q4LDR2 81 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 VARS2Q5ST30 1063 aaKnown RBP13.24□□□□□ -0.29
CTNS-201ENST00000046640 C6orf52Q5T4I8 152 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 MANEALQ5VSG8 457 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 TMC7Q7Z402 723 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 NUP93Q8N1F7 819 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 CFAP52Q8N1V2 620 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 LRGUKQ96M69 825 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 TSGA13Q96PP4 275 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 ILKAPQ9H0C8 392 aaPredicted RBP13.24□□□□□ -0.29
CTNS-201ENST00000046640 VCX3BQ9H321 246 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 SUDS3Q9H7L9 328 aaPredicted RBP13.24□□□□□ -0.29
CTNS-201ENST00000046640 UBAP1Q9NZ09 502 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 PEX1O43933 1283 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 TSPAN8P19075 237 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 PIK3R1P27986 724 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 GEMP55040 296 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 SLC12A1Q13621 1099 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 FLOT2Q14254 428 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 FSCBQ5H9T9 825 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 MS4A13Q5J8X5 152 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 C10orf120Q5SQS8 335 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 EPGNQ6UW88 154 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 RBM44Q6ZP01 1051 aaKnown RBP13.24□□□□□ -0.29
CTNS-201ENST00000046640 SH3RF2Q8TEC5 729 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 GIPC2Q8TF65 315 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 ISL2Q96A47 359 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 MCMBPQ9BTE3 642 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 GPR62Q9BZJ7 368 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 VCX3AQ9NNX9 186 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 FBXO5Q9UKT4 447 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
CTNS-201ENST00000046640 FGF10O15520 208 aaPredicted RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 CPB1P15086 417 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 TFEBP19484 476 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 ACLYP53396 1101 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 SLC12A2P55011 1212 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 RAB10P61026 200 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 HNRNPDQ14103 355 aaKnown RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 LSM12Q3MHD2 195 aaKnown RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 CCSAPQ6IQ19 270 aaPredicted RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 LRRC8EQ6NSJ5 796 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 NEPROQ6NW34 567 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 DSELQ8IZU8 1212 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 HEXDCQ8WVB3 486 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 SERPINB11Q96P15 392 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 SEMA6AQ9H2E6 1030 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 CRISPLD1Q9H336 500 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 SP110Q9HB58 689 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 MT-CO1P00395 513 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 ADRA1AP35348 466 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 MTTPP55157 894 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 MS4A2Q01362 244 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 CDK18Q07002 472 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 TAF10Q12962 218 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 TRIM71Q2Q1W2 868 aaKnown RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 FBXL22Q6P050 247 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 RANBP10Q6VN20 620 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 KBTBD6Q86V97 674 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 MON1AQ86VX9 555 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 PQLC1Q8N2U9 271 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 ARHGAP18Q8N392 663 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 TTC16Q8NEE8 873 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 BHLHE22Q8NFJ8 381 aaPredicted RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 SREK1Q8WXA9 508 aaKnown RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 FBXO32Q969P5 355 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 PHF21BQ96EK2 531 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 RPRD1AQ96P16 312 aaPredicted RBP13.23□□□□□ -0.29
CTNS-201ENST00000046640 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 NPAS2Q99743 824 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 CRYL1Q9Y2S2 319 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 TLL2Q9Y6L7 1015 aa13.23□□□□□ -0.29
CTNS-201ENST00000046640 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
CTNS-201ENST00000046640 SCAMP3O14828 347 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms