RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 RGL4Q8IZJ4 473 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 DHRSXQ8N5I4 330 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 C1orf127Q8N9H9 656 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 SLC4A11Q8NBS3 891 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 SYT17Q9BSW7 474 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 REEP1Q9H902 201 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 DYTNA2CJ06 578 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 AMD1P17707 334 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 MBTD1Q05BQ5 628 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 FGD3Q5JSP0 725 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 EXOC3L1Q86VI1 746 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 PHC3Q8NDX5 983 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 MYO19Q96H55 970 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 PTPRHQ9HD43 1115 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 RPS6KA6Q9UK32 745 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 VWA7Q9Y334 891 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 A0A1W2PQH9 124 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 TNFAIP8O95379 198 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 KCTD4Q8WVF5 259 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 PCDHB9Q9Y5E1 797 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 TCRBV9S1A1TA0A576 114 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 MDM4O15151 490 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 ELNP15502 786 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 SHROOM1Q2M3G4 852 aaPredicted RBP23.3■■□□□ 1.32
TARBP1-201ENST00000040877 PACS1Q6VY07 963 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 HDAC10Q969S8 669 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 ZNF232Q9UNY5 417 aa23.3■■□□□ 1.32
TARBP1-201ENST00000040877 MAXP61244 160 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 SLC20A2Q08357 652 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 BST1Q10588 318 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 TRIM16LQ309B1 348 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 MARK2Q7KZI7 788 aaKnown RBP23.29■■□□□ 1.32
TARBP1-201ENST00000040877 BEND7Q8N7W2 519 aaPredicted RBP23.29■■□□□ 1.32
TARBP1-201ENST00000040877 SHPRHQ149N8 1683 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 C5orf60A6NFR6 353 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 PEX1O43933 1283 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 FYNP06241 537 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 MON1BQ7L1V2 547 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 HNRNPABQ99729 332 aaKnown RBP23.29■■□□□ 1.32
TARBP1-201ENST00000040877 OSBPL6Q9BZF3 934 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 BPIFA1Q9NP55 256 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 TMPRSS4Q9NRS4 437 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 SNX15Q9NRS6 342 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 HS6ST1O60243 411 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 LCA5LO95447 670 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 SLC35G4P0C7Q5 338 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 YTHDF3Q7Z739 585 aaKnown RBP23.29■■□□□ 1.32
TARBP1-201ENST00000040877 EPB41L4BQ9H329 900 aa23.29■■□□□ 1.32
TARBP1-201ENST00000040877 ZFRQ96KR1 1074 aaKnown RBP23.29■■□□□ 1.32
TARBP1-201ENST00000040877 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 GCATO75600 419 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 MAPKAPK3Q16644 382 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 SLC12A4Q9UP95 1085 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 SLC27A6Q9Y2P4 619 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 RPTORQ8N122 1335 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 NT5C1B-RDH14C9J2C7 533 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 H3BN98 237 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 ARMCX4Q5H9R4 360 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 RP9Q8TA86 221 aaKnown RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 NKD2Q969F2 451 aaPredicted RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 STMN3Q9NZ72 180 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 PCDHB1Q9Y5F3 818 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 BCLAF3A2AJT9 711 aaKnown RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 AVILO75366 819 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 COL6A2P12110 1019 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 MAGEA10P43363 369 aaPredicted RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 TSNQ15631 228 aaKnown RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 TYW3Q6IPR3 259 aaKnown RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 CYP2R1Q6VVX0 501 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 R3HCC1LQ7Z5L2 792 aaKnown RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 SNX27Q96L92 541 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 NDNQ99608 321 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 ROGDIQ9GZN7 287 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 CCDC189A1A4V9 331 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 ELFN1P0C7U0 828 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 MC4RP32245 332 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 DET1Q7L5Y6 550 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 CLYBLQ8N0X4 340 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 MBOAT7Q96N66 472 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 GOLGA2P5Q9HBQ8 144 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 XPR1Q9UBH6 696 aa23.28■■□□□ 1.32
TARBP1-201ENST00000040877 ARIH1Q9Y4X5 557 aaPredicted RBP23.28■■□□□ 1.32
TARBP1-201ENST00000040877 SOWAHBA6NEL2 793 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 TRAFD1O14545 582 aaPredicted RBP23.27■■□□□ 1.32
TARBP1-201ENST00000040877 PRKG2Q13237 762 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 LRRC74BQ6ZQY2 392 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 CHPFQ8IZ52 775 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 CFAP97Q9P2B7 532 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 RGSL1A5PLK6 1076 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 EOMESO95936 686 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 ZNF446Q9NWS9 450 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 COL20A1Q9P218 1284 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 MYO5BQ9ULV0 1848 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 CACNB4O00305 520 aaPredicted RBP23.27■■□□□ 1.32
TARBP1-201ENST00000040877 VAV1P15498 845 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 INO80DQ53TQ3 878 aaPredicted RBP23.27■■□□□ 1.32
TARBP1-201ENST00000040877 ZNF549Q6P9A3 640 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 ZNF276Q8N554 614 aa23.27■■□□□ 1.32
TARBP1-201ENST00000040877 C2orf15Q8WU43 125 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms