RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	MRFAP1L1	Q96HT8	127 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	ZNF641	Q96N77	438 aa	Predicted RBP	15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	ZNF599	Q96NL3	588 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	TUBGCP5	Q96RT8	1024 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	MYOC	Q99972	504 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	CALN1	Q9BXU9	219 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	SUV39H2	Q9H5I1	410 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	ERVMER34-1	Q9H9K5	563 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	FZD3	Q9NPG1	666 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	SEPT3	Q9UH03	358 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	GGT7	Q9UJ14	662 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	PCOLCE2	Q9UKZ9	415 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	INTU	Q9ULD6	942 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	ITM2B	Q9Y287	266 aa		15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	GOLGA4	Q13439	2230 aa	Known RBP	15.21	■□□□□ 0.03
PHGDH-231	ENST00000641939	IGLON5	A6NGN9	336 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	AREL1	O15033	823 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	YKT6	O15498	198 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	SPINT1	O43278	529 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	CBFA2T3	O75081	653 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	MTA2	O94776	668 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	TIMP2	P16035	220 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	RGR	P47804	291 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	RENBP	P51606	427 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	SUOX	P51687	545 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	FAM193A	P78312	1265 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	IL9R	Q01113	521 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	SGCG	Q13326	291 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	FGL2	Q14314	439 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	LBR	Q14739	615 aa	Known RBP	15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	TRIP6	Q15654	476 aa	Known RBP	15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	PRAMEF14	Q5SWL7	426 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	GAS2L3	Q86XJ1	694 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	SPATS2	Q86XZ4	545 aa	Known RBP	15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	MAP7D3	Q8IWC1	876 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	OXR1	Q8N573	874 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	ATPAF2	Q8N5M1	289 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	RHBDD1	Q8TEB9	315 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	RFFL	Q8WZ73	363 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	PSKH2	Q96QS6	385 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	ZNF670	Q9BS34	389 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	C1QTNF2	Q9BXJ5	285 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	ATP13A3	Q9H7F0	1226 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	KLHL11	Q9NVR0	708 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	HS3ST3A1	Q9Y663	406 aa		15.2	■□□□□ 0.02
PHGDH-231	ENST00000641939	TSPAN11	A1L157	253 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	BUB1B	O60566	1050 aa	Predicted RBP	15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	MAFK	O60675	156 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	PAK4	O96013	591 aa	Predicted RBP	15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	THEGL	P0DJG4	465 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	XPA	P23025	273 aa	Predicted RBP	15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	SERPINA4	P29622	427 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	GRK6	P43250	576 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	ARRB1	P49407	418 aa	Predicted RBP	15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	SLC10A7	Q0GE19	358 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	ZNF235	Q14590	738 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	SHB	Q15464	509 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	ANKRD20A8P	Q5CZ79	823 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	LRRC73	Q5JTD7	316 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	ZFYVE27	Q5T4F4	411 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	CFAP58	Q5T655	872 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	BRAT1	Q6PJG6	821 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	ABI3BP	Q7Z7G0	1075 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	CAMK1D	Q8IU85	385 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	LRRC49	Q8IUZ0	686 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	PCDH19	Q8TAB3	1148 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	FAM174A	Q8TBP5	190 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	ASB12	Q8WXK4	309 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	LENG8	Q96PV6	779 aa	Predicted RBP	15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	CDC6	Q99741	560 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	ANGPTL2	Q9UKU9	493 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	BTBD3	Q9Y2F9	522 aa		15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	MAP1B	P46821	2468 aa	Known RBP	15.19	■□□□□ 0.02
PHGDH-231	ENST00000641939	COL5A1	P20908	1838 aa	Predicted RBP	15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939		A6NNZ2	444 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	MUSK	O15146	869 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	RAD51B	O15315	384 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	MFSD11	O43934	449 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	PEX11B	O96011	259 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	KDELR1	P24390	212 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	MAGEA1	P43355	309 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	RXRG	P48443	463 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	SCNN1B	P51168	640 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	CLDN2	P57739	230 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	AP1S1	P61966	158 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	SHC2	P98077	582 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	BCL2L1	Q07817	233 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	ELP6	Q0PNE2	266 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	PAFAH1B3	Q15102	231 aa	Known RBP	15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	TCEAL1	Q15170	157 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	UGP2	Q16851	508 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	INAVA	Q3KP66	663 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	NCBP2-AS2	Q69YL0	99 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	GCNT7	Q6ZNI0	430 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	GLRX5	Q86SX6	157 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	CCDC170	Q8IYT3	715 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	BBS5	Q8N3I7	341 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	OR13H1	Q8NG92	308 aa		15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	BAHD1	Q8TBE0	780 aa	Predicted RBP	15.18	■□□□□ 0.02
PHGDH-231	ENST00000641939	CXorf40A	Q8TE69	158 aa		15.18	■□□□□ 0.02

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