RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PEX13Q92968 403 aa16.6■□□□□ 0.25
PHGDH-216ENST00000641375 ELAC2Q9BQ52 826 aaKnown RBP16.6■□□□□ 0.25
PHGDH-216ENST00000641375 DCDC2Q9UHG0 476 aa16.6■□□□□ 0.25
PHGDH-216ENST00000641375 ACTL7AQ9Y615 435 aa16.6■□□□□ 0.25
PHGDH-216ENST00000641375 DOCK6Q96HP0 2047 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 E2F8A0AVK6 867 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 GLRA3O75311 464 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 MZF1P28698 734 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-216ENST00000641375 IRS1P35568 1242 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 SERPINB8P50452 374 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 SCNN1BP51168 640 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 THOC5Q13769 683 aaKnown RBP16.59■□□□□ 0.25
PHGDH-216ENST00000641375 CYTH1Q15438 398 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 ZKSCAN8Q15776 578 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-216ENST00000641375 TSTD2Q5T7W7 516 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 CDHR3Q6ZTQ4 885 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 DCAF4L2Q8NA75 395 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 CALML6Q8TD86 181 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 ZNF75CPQ92670 426 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-216ENST00000641375 PTPRN2Q92932 1015 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 FAM167BQ9BTA0 163 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 MCMBPQ9BTE3 642 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 TASP1Q9H6P5 420 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 NOD2Q9HC29 1040 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 SCUBE2Q9NQ36 999 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 DNMT3BQ9UBC3 853 aaKnown RBP16.59■□□□□ 0.25
PHGDH-216ENST00000641375 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 OR51B4Q9Y5P0 310 aa16.59■□□□□ 0.25
PHGDH-216ENST00000641375 MROH6A6NGR9 719 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 GOLGA8TH3BQL2 631 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 SNX3O60493 162 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 CLASP2O75122 1294 aaKnown RBP16.58■□□□□ 0.25
PHGDH-216ENST00000641375 SIN3BO75182 1162 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 ZMPSTE24O75844 475 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 NDST3O95803 873 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 CYBBP04839 570 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 RHOP08100 348 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 MYOGP15173 224 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 NSUN2Q08J23 767 aaKnown RBP eCLIP16.58■□□□□ 0.25
PHGDH-216ENST00000641375 ITIH4Q14624 930 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 ELMSAN1Q6PJG2 1045 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 KYAT3Q6YP21 454 aaKnown RBP16.58■□□□□ 0.25
PHGDH-216ENST00000641375 DCLK2Q8N568 766 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 NUDCD1Q96RS6 583 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 C2orf49Q9BVC5 232 aaPredicted RBP16.58■□□□□ 0.25
PHGDH-216ENST00000641375 C12orf65Q9H3J6 166 aaKnown RBP16.58■□□□□ 0.25
PHGDH-216ENST00000641375 RHOJQ9H4E5 214 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 SLC2A6Q9UGQ3 507 aa16.58■□□□□ 0.25
PHGDH-216ENST00000641375 GBF1Q92538 1859 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 GJB3O75712 270 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 EPCAMP16422 314 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 ARNTP27540 789 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 CSKP41240 450 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 MAGEA12P43365 314 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 PDE1CQ14123 709 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-216ENST00000641375 INSCQ1MX18 579 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 FYB2Q5VWT5 728 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 SH3RF2Q8TEC5 729 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 ACDQ96AP0 544 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 VPS39Q96JC1 886 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 MANSC1Q9H8J5 431 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 SNX15Q9NRS6 342 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 ZDHHC7Q9NXF8 308 aa16.58■□□□□ 0.24
PHGDH-216ENST00000641375 ATXN2Q99700 1313 aaKnown RBP16.57■□□□□ 0.24
PHGDH-216ENST00000641375 NRG2O14511 850 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-216ENST00000641375 SNAP91O60641 907 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 TMCC1O94876 653 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 MPOP05164 745 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 CA3P07451 260 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 SERPINB4P48594 390 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 POLD2P49005 469 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 TEAD2Q15562 447 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 RALGPS1Q5JS13 557 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 RETSATQ6NUM9 610 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 KIAA0408Q6ZU52 694 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 SPRED2Q7Z698 418 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 TRIM42Q8IWZ5 723 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 BRSK1Q8TDC3 778 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 BHMTQ93088 406 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 TCEAL4Q96EI5 215 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 ALG14Q96F25 216 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 TRIB3Q96RU7 358 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 KIAA1522Q9P206 1035 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-216ENST00000641375 VPS51Q9UID3 782 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 STARD13Q9Y3M8 1113 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 ANKRD36A6QL64 1941 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 CHD7Q9P2D1 2997 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 WDR91A4D1P6 747 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 ARHGEF15O94989 841 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 CD160O95971 181 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 POU2F2P09086 479 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 NEFHP12036 1026 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 RGRP47804 291 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 RNF43Q68DV7 783 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 NEPROQ6NW34 567 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 TPGS1Q6ZTW0 290 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 SPATA21Q7Z572 469 aa16.57■□□□□ 0.24
PHGDH-216ENST00000641375 METTL3Q86U44 580 aaKnown RBP16.57■□□□□ 0.24
PHGDH-216ENST00000641375 ZC3HC1Q86WB0 502 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms