RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MAGEA3P43357 314 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 IST1P53990 364 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 CDK18Q07002 472 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 IFRD2Q12894 506 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SPCS2Q15005 226 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 C6orf10Q5SRN2 563 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 THOC7Q6I9Y2 204 aaKnown RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 DCLRE1AQ6PJP8 1040 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 TBPL2Q6SJ96 375 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 BRSK2Q8IWQ3 736 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 RYBPQ8N488 228 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SREK1Q8WXA9 508 aaKnown RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 DLG3Q92796 817 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 SDCCAG3Q96C92 435 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 CLIP3Q96DZ5 547 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 KCTD15Q96SI1 283 aaPredicted RBP13.88□□□□□ -0.19
SCARB2-227ENST00000640957 RBBP8Q99708 897 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 ING2Q9H160 280 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 AKT3Q9Y243 479 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 TMEM98Q9Y2Y6 226 aa13.88□□□□□ -0.19
SCARB2-227ENST00000640957 NUP205Q92621 2012 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 PPP6CO00743 305 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-227ENST00000640957 MED7O43513 233 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 BMP10O95393 424 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 PGAM1P18669 254 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 TGFBR1P36897 503 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 IFITM3Q01628 133 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 CYP51A1Q16850 503 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 PPP1R26Q5T8A7 1209 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-227ENST00000640957 NIPA1Q7RTP0 329 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 NUDT8Q8WV74 236 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 C17orf50Q8WW18 174 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 PBXIP1Q96AQ6 731 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 FEM1CQ96JP0 617 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 TSNARE1Q96NA8 513 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 MUS81Q96NY9 551 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 PRDM12Q9H4Q4 367 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 IFT80Q9P2H3 777 aaPredicted RBP13.87□□□□□ -0.19
SCARB2-227ENST00000640957 SIX4Q9UIU6 781 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 H0YCG3 227 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 ATP5BP06576 529 aaKnown RBP13.87□□□□□ -0.19
SCARB2-227ENST00000640957 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
SCARB2-227ENST00000640957 ADAM17P78536 824 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 CSHL1Q14406 222 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 CCDC153Q494R4 210 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 PAGE2BQ5JRK9 111 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 CTU1Q7Z7A3 348 aaKnown RBP13.87□□□□□ -0.19
SCARB2-227ENST00000640957 C1orf127Q8N9H9 656 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 KCNN1Q92952 543 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 CSPG4P5Q96PW8 444 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 TCF12Q99081 682 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 BEGAINQ9BUH8 593 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 LHPPQ9H008 270 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
SCARB2-227ENST00000640957 ERGIC3Q9Y282 383 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 PCDHGA3Q9Y5H0 932 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 SQORQ9Y6N5 450 aa13.87□□□□□ -0.19
SCARB2-227ENST00000640957 SDHDO14521 159 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 AURKAO14965 403 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 UBDO15205 165 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 HOXC6P09630 235 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ZNF12P17014 697 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ARL1P40616 181 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 TIGD2Q4W5G0 525 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 TMEM236Q5W0B7 351 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 MAMDC4Q6UXC1 1216 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ABHD15Q6UXT9 468 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 CEP97Q8IW35 865 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 DDIASQ8IXT1 998 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ZNF567Q8N184 647 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SIX5Q8N196 739 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SMG8Q8ND04 991 aaKnown RBP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SNX19Q92543 992 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 LRRC39Q96DD0 335 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 MCRS1Q96EZ8 462 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ANKRD36BP1Q96IX9 119 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 EFHD1Q9BUP0 239 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 FRMD8P1Q9BZ68 369 aaPredicted RBP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 CXCL16Q9H2A7 254 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 POMKQ9H5K3 350 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SPAG4Q9NPE6 437 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 FOCADQ5VW36 1801 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 PTPRFP10586 1907 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 CCL22O00626 93 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 KPNA6O60684 536 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SULT1C4O75897 302 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ITGB6P18564 788 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 DGCR6Q14129 220 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 RABL3Q5HYI8 236 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 NIPAL1Q6NVV3 410 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 DHRS4L2Q6PKH6 230 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 KCNMB4Q86W47 210 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ACMSDQ8TDX5 336 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 ZFP90Q8TF47 636 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 STARD8Q92502 1023 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 HDAC10Q969S8 669 aa13.86□□□□□ -0.19
SCARB2-227ENST00000640957 FAM96AQ9H5X1 160 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms