RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	FAM204A	Q9H8W3	233 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	EXOC1	Q9NV70	894 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	KL	Q9UEF7	1012 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	PILRA	Q9UKJ1	303 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	TBC1D30	Q9Y2I9	924 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	KCNMB2	Q9Y691	235 aa		11.88	□□□□□ -0.51
PAX6-238	ENST00000638755	CELSR1	Q9NYQ6	3014 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755		A0A0D9SEW6	157 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	TOR1B	O14657	336 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	POLR2D	O15514	142 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	NUDT21	O43809	227 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	ADCY5	O95622	1261 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	MPST	P25325	297 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	BRD2	P25440	801 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	HTR1B	P28222	390 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	GK	P32189	559 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	GTF2H1	P32780	548 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	CSTF2	P33240	577 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	CCNH	P51946	323 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	YWHAE	P62258	255 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	MC1R	Q01726	317 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	MRPL49	Q13405	166 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	STK38	Q15208	465 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	IRF4	Q15306	451 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	KLHL40	Q2TBA0	621 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	DCAF12	Q5T6F0	453 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	ERICH6B	Q5W0A0	696 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	ANKS6	Q68DC2	871 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	KCTD16	Q68DU8	428 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	TMEM270	Q6UE05	265 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	KDELC2	Q7Z4H8	507 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	ZC3H18	Q86VM9	953 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	FAM129C	Q86XR2	697 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	NLGN4X	Q8N0W4	816 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	RYBP	Q8N488	228 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	AGBL5	Q8NDL9	886 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	OR6K2	Q8NGY2	324 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	RAB7B	Q96AH8	199 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	ZSWIM1	Q9BR11	485 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	EFHD1	Q9BUP0	239 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	C1QTNF7	Q9BXJ2	289 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	DPEP2	Q9H4A9	486 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	MAGEF1	Q9HAY2	307 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	OCIAD1	Q9NX40	245 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	KIAA1257	Q9ULG3	409 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	KCTD3	Q9Y597	815 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	MRPS18B	Q9Y676	258 aa	Known RBP	11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	NF1	P21359	2839 aa		11.87	□□□□□ -0.51
PAX6-238	ENST00000638755	SHANK1	Q9Y566	2161 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TMEM110-MUSTN1	A8MSY1	372 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	SART1	O43290	800 aa	Known RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	KLRC4	O43908	158 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TM7SF2	O76062	418 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TNF	P01375	233 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	IGLV3-25	P01717	112 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	PDGFA	P04085	211 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	SLC2A3	P11169	496 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	MAP4	P27816	1152 aa	Known RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	CCR1	P32246	355 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	PSMC2	P35998	433 aa	Known RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	CDH4	P55283	916 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	LRMP	Q12912	555 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	CNGA2	Q16280	664 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	EDRF1	Q3B7T1	1238 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	CARD16	Q5EG05	197 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	OGFOD3	Q6PK18	319 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	DCAF4L2	Q8NA75	395 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TP53I13	Q8NBR0	393 aa	Predicted RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	PDXP	Q96GD0	296 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TCTN2	Q96GX1	697 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	WRAP53	Q9BUR4	548 aa	Known RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TRIM62	Q9BVG3	475 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TM6SF2	Q9BZW4	377 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	SIK2	Q9H0K1	926 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	POPDC2	Q9HBU9	364 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	DDIT4	Q9NX09	232 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	ERRFI1	Q9UJM3	462 aa	Predicted RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	TRAF3IP3	Q9Y228	551 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	FCF1	Q9Y324	198 aa	Known RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	MAP4K5	Q9Y4K4	846 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	OR1A2	Q9Y585	309 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	HS3ST4	Q9Y661	456 aa		11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	MORC2	Q9Y6X9	1032 aa	Predicted RBP	11.86	□□□□□ -0.51
PAX6-238	ENST00000638755	CHD5	Q8TDI0	1954 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	APC	P25054	2843 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	RHPN2P1	A8MT19	583 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	TCP11X1	B4DZS4	312 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	LDLR	P01130	860 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	PRF1	P14222	555 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	PEX5	P50542	639 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	MAZ	P56270	477 aa	Known RBP	11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	YWHAZ	P63104	245 aa	Known RBP	11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	NAA30	Q147X3	362 aa	Predicted RBP	11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	NFATC4	Q14934	902 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	RABEP1	Q15276	862 aa		11.85	□□□□□ -0.51
PAX6-238	ENST00000638755	ALF	Q53S48	1182 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 49 ms