RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SLC1A2P43004 574 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 TAF6P49848 677 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 PLK1P53350 603 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 PRAMEP78395 509 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 CSHL1Q14406 222 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 SQLEQ14534 574 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 PRPSAP1Q14558 356 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 UGP2Q16851 508 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 FAM47BQ8NA70 645 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 DIS3LQ8TF46 1054 aaKnown RBP11.02□□□□□ -0.65
SNIP1-204ENST00000638725 HSPBAP1Q96EW2 488 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 SLC9A7Q96T83 725 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 MED10Q9BTT4 135 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 TUT1Q9H6E5 874 aaKnown RBP11.02□□□□□ -0.65
SNIP1-204ENST00000638725 ELP3Q9H9T3 547 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 SPAG4Q9NPE6 437 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 CHST12Q9NRB3 414 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 DUS2Q9NX74 493 aaKnown RBP11.02□□□□□ -0.65
SNIP1-204ENST00000638725 FBXW11Q9UKB1 542 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 SARDHQ9UL12 918 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 PCNTO95613 3336 aa11.02□□□□□ -0.65
SNIP1-204ENST00000638725 SOCS2O14508 198 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 COL1A2P08123 1366 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 NCAM1P13591 858 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 ATP5F1P24539 256 aaPredicted RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 IGFBP6P24592 240 aaPredicted RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 STT3AP46977 705 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 SCAPQ12770 1279 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 BPTFQ12830 3046 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 PCID2Q5JVF3 399 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 DUS1LQ6P1R4 473 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 KLHL35Q6PF15 583 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 ARHGAP36Q6ZRI8 547 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 ZBTB49Q6ZSB9 765 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 GPRIN1Q7Z2K8 1008 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 CNTN4Q8IWV2 1026 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 IPMKQ8NFU5 416 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 RIN3Q8TB24 985 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 LZICQ8WZA0 190 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 TOP1MTQ969P6 601 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 VAT1Q99536 393 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 OSMRQ99650 979 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 MRPL57Q9BQC6 102 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 RNF39Q9H2S5 420 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 MRPL40Q9NQ50 206 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 CD300AQ9UGN4 299 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 IPO11Q9UI26 975 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 CSADQ9Y600 493 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 SAC3D1A6NKF1 404 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 SRP72O76094 671 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 LRIG2O94898 1065 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 CD4P01730 458 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 BAG6P46379 1132 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 ARCN1P48444 511 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 TRAP1Q12931 704 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 MAPRE2Q15555 327 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 RBM20Q5T481 1227 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 KIAA0319Q5VV43 1072 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 TAPT1Q6NXT6 567 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 CUZD1Q86UP6 607 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 SNRNP27Q8WVK2 155 aaKnown RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 CANT1Q8WVQ1 401 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 KCTD13Q8WZ19 329 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 DPF3Q92784 378 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 UHRF1Q96T88 793 aaPredicted RBP11.01□□□□□ -0.65
SNIP1-204ENST00000638725 TBL1YQ9BQ87 522 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 FICDQ9BVA6 458 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 ANKRD60Q9BZ19 345 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 BRD8Q9H0E9 1235 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 CROTQ9UKG9 612 aa11.01□□□□□ -0.65
SNIP1-204ENST00000638725 NRCAMQ92823 1304 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 POLR2AP24928 1970 aaKnown RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 A0A0G2JLL6 359 aaPredicted RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 AKAP10O43572 662 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 GPC4O75487 556 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 SNRPB2P08579 225 aaKnown RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 ATP6V1B2P21281 511 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 YWHAQP27348 245 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 LRPAP1P30533 357 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 ADCYAP1R1P41586 468 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 HCAR3P49019 387 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 SLC7A2P52569 658 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 DAOAP59103 153 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 NHSL2Q5HYW2 709 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 ZNF470Q6ECI4 717 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 NOTUMQ6P988 496 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 KDELC2Q7Z4H8 507 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 PRRT2Q7Z6L0 340 aaPredicted RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 LINC00523Q86TU6 105 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 PNPLA1Q8N8W4 532 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 PPTC7Q8NI37 304 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 EDEM1Q92611 657 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 PBXIP1Q96AQ6 731 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 ZNF419Q96HQ0 510 aaPredicted RBP11□□□□□ -0.65
SNIP1-204ENST00000638725 ADAMTS10Q9H324 1103 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 MEAF6Q9HAF1 191 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 IGSF5Q9NSI5 407 aa11□□□□□ -0.65
SNIP1-204ENST00000638725 OR12D3Q9UGF7 316 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms