RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 NOL6Q9H6R4 1146 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-250ENST00000637809 NOCTQ9UK39 431 aaKnown RBP12.3□□□□□ -0.44
CACNA1A-250ENST00000637809 MAST4O15021 2626 aa12.3□□□□□ -0.44
CACNA1A-250ENST00000637809 C2CD4BA6NLJ0 364 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 KDELR3O43731 214 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 MMP20O60882 483 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 RAMP2O60895 175 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 TMCC1O94876 653 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 C6P13671 934 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 TIMP2P16035 220 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 MMP8P22894 467 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 RPIAP49247 311 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 THOP1P52888 689 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 HDAC4P56524 1084 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 SNRPD1P62314 119 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 YPEL5P62699 121 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 CDO1Q16878 200 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 HSP90AA4PQ58FG1 418 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 GDPD4Q6W3E5 623 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 TTC7BQ86TV6 843 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 WDR36Q8NI36 951 aaKnown RBP12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 JOSD2Q8TAC2 188 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 WDR48Q8TAF3 677 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 GPT2Q8TD30 523 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 SLC20A1Q8WUM9 679 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 CENPIQ92674 756 aaPredicted RBP12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 NAT6Q93015 286 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 ARHGEF26Q96DR7 871 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 EPAS1Q99814 870 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 STK33Q9BYT3 514 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 KLC2Q9H0B6 622 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 RABGEF1Q9UJ41 708 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 PADI4Q9UM07 663 aa12.29□□□□□ -0.44
CACNA1A-250ENST00000637809 B8ZZF3 427 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 TOR1BO14657 336 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 EFSO43281 561 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 TM7SF2O76062 418 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 TNFSF15O95150 251 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 GJB6O95452 261 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 CYP1A1P04798 512 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 ANXA6P08133 673 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 PLEKP08567 350 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 PRKCSHP14314 528 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 CHRNB2P17787 502 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 EIF4A3P38919 411 aaKnown RBP12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 PTPN9P43378 593 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 TPD52L1Q16890 204 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 KLHL40Q2TBA0 621 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 DPCR1Q3MIW9 517 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 ARL13BQ3SXY8 428 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 FAXCQ5TGI0 409 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 KIAA1614Q5VZ46 1190 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 NYAP1Q6ZVC0 841 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 STRADAQ7RTN6 431 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 B3GNT8Q7Z7M8 397 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 PHLDB2Q86SQ0 1253 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 FAM114A1Q8IWE2 563 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 ARL14Q8N4G2 192 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 CCDC185Q8N715 623 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 ARL10Q8N8L6 244 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 NETO2Q8NC67 525 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 MSANTD4Q8NCY6 345 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 GLMNQ92990 594 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 TBC1D31Q96DN5 1066 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 CCDC97Q96F63 343 aaPredicted RBP12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 GDAP1L1Q96MZ0 367 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 SLC13A1Q9BZW2 595 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 TTYH3Q9C0H2 523 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 DKK3Q9UBP4 350 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 HPCAL4Q9UM19 191 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 MFHAS1Q9Y4C4 1052 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 TRPM6Q9BX84 2022 aa12.28□□□□□ -0.44
CACNA1A-250ENST00000637809 COL6A6A6NMZ7 2263 aa12.27□□□□□ -0.44
CACNA1A-250ENST00000637809 CCDC187A0A096LP49 1063 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 INSIG1O15503 277 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 BUB1O43683 1085 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 ITGA2BP08514 1039 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 SDC4P31431 198 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 PEX5P50542 639 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 HK3P52790 923 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 UBE2HP62256 183 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 FMO1Q01740 532 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 CDR2Q01850 454 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 PPARDQ03181 441 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 PTP4A2Q12974 167 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 SPIDRQ14159 915 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 IRF4Q15306 451 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 ALG11Q2TAA5 492 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 WSCD2Q2TBF2 565 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 TMEM52BQ4KMG9 183 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 KCTD16Q68DU8 428 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 ESRP1Q6NXG1 681 aaKnown RBP12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 FOXR1Q6PIV2 292 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 KYQ8NBH2 561 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 SLC30A5Q8TAD4 765 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 CXorf40AQ8TE69 158 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 MED8Q96G25 268 aa12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 LIN37Q96GY3 246 aaPredicted RBP12.27□□□□□ -0.45
CACNA1A-250ENST00000637809 WRAP53Q9BUR4 548 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms