RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TDRD6O60522 2096 aaKnown RBP18.7■□□□□ 0.58
CLN6-220ENST00000637450 MYLKQ15746 1914 aa18.7■□□□□ 0.58
CLN6-220ENST00000637450 ANKRD62A6NC57 917 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 RIOK3O14730 519 aaKnown RBP18.69■□□□□ 0.58
CLN6-220ENST00000637450 TPP1O14773 563 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 IGSF6O95976 241 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 ITIH2P19823 946 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 RHOAP61586 193 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 YPEL5P62699 121 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 CYTH1Q15438 398 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 DEFB133Q30KQ1 61 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 PARP15Q460N3 678 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 LRRC73Q5JTD7 316 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 SASS6Q6UVJ0 657 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 APTXQ7Z2E3 356 aaKnown RBP18.69■□□□□ 0.58
CLN6-220ENST00000637450 VPS36Q86VN1 386 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 MAPK15Q8TD08 544 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 CXorf40AQ8TE69 158 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 MCEEQ96PE7 176 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 UBL7Q96S82 380 aaPredicted RBP18.69■□□□□ 0.58
CLN6-220ENST00000637450 EPAS1Q99814 870 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 CNPY3Q9BT09 278 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 CPEB1Q9BZB8 566 aaKnown RBP18.69■□□□□ 0.58
CLN6-220ENST00000637450 CATSPERBQ9H7T0 1116 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 SPASTQ9UBP0 616 aa18.69■□□□□ 0.58
CLN6-220ENST00000637450 PNMA8BQ9ULN7 279 aaPredicted RBP18.69■□□□□ 0.58
CLN6-220ENST00000637450 EME2A4GXA9 379 aaPredicted RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 TOR1BO14657 336 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 INSIG1O15503 277 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 LZTS3O60299 673 aaPredicted RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 USP12O75317 370 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 CSO75390 466 aaKnown RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 GCATO75600 419 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 TM7SF2O76062 418 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 MPOP05164 745 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 CDK11BP21127 795 aaKnown RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 IGFALSP35858 605 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 THOP1P52888 689 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 CDKN3Q16667 212 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 TMEM52BQ4KMG9 183 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 ACAD10Q6JQN1 1059 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 MCOLN2Q8IZK6 566 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 RBFAQ8N0V3 343 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 LSMEM2Q8N112 164 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 TP53I13Q8NBR0 393 aaPredicted RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 HCAR2Q8TDS4 363 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 ZNF578Q96N58 590 aaPredicted RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 IL12RB2Q99665 862 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 C1QTNF7Q9BXJ2 289 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 HSD3B7Q9H2F3 369 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 TCEAL2Q9H3H9 227 aaPredicted RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 MBNL1Q9NR56 388 aaKnown RBP18.68■□□□□ 0.58
CLN6-220ENST00000637450 PTPRQQ9UMZ3 2332 aa18.68■□□□□ 0.58
CLN6-220ENST00000637450 CPED1A4D0V7 1026 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 EIF4E1BA6NMX2 242 aaKnown RBP18.67■□□□□ 0.58
CLN6-220ENST00000637450 FGF10O15520 208 aaPredicted RBP18.67■□□□□ 0.58
CLN6-220ENST00000637450 DXOO77932 396 aaKnown RBP18.67■□□□□ 0.58
CLN6-220ENST00000637450 TGM2P21980 687 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 LSSP48449 732 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 SUOXP51687 545 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 CCDC173Q0VFZ6 552 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 NCAPHQ15003 741 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 STX1AQ16623 288 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 KLHL40Q2TBA0 621 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 GUSBP11Q6P575 273 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 DCUN1D2Q6PH85 259 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 TBATAQ96M53 351 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 BOCQ9BWV1 1114 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 POLR1BQ9H9Y6 1135 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 LHX3Q9UBR4 397 aa18.67■□□□□ 0.58
CLN6-220ENST00000637450 APOBEC3BQ9UH17 382 aaKnown RBP18.67■□□□□ 0.58
CLN6-220ENST00000637450 CCDC172P0C7W6 258 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 FERP16591 822 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 HTR7P34969 479 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 EIF4A3P38919 411 aaKnown RBP18.66■□□□□ 0.58
CLN6-220ENST00000637450 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
CLN6-220ENST00000637450 GABREP78334 506 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 OGDHQ02218 1023 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 TLE3Q04726 772 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 C1orf61Q13536 156 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 NR0B2Q15466 257 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 ISXQ2M1V0 245 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 PRRT3Q5FWE3 981 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 MACC1Q6ZN28 852 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 EFL1Q7Z2Z2 1120 aaKnown RBP18.66■□□□□ 0.58
CLN6-220ENST00000637450 IRF2BP2Q7Z5L9 587 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 DNAAF5Q86Y56 855 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 SPACA3Q8IXA5 215 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 PHACTR4Q8IZ21 702 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 TPCN2Q8NHX9 752 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 HIC2Q96JB3 615 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 VCPIP1Q96JH7 1222 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 FCRL3Q96P31 734 aaPredicted RBP18.66■□□□□ 0.58
CLN6-220ENST00000637450 WRAP53Q9BUR4 548 aaKnown RBP18.66■□□□□ 0.58
CLN6-220ENST00000637450 SLC13A1Q9BZW2 595 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 LRRC19Q9H756 370 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 PDFQ9HBH1 243 aa18.66■□□□□ 0.58
CLN6-220ENST00000637450 UBA2Q9UBT2 640 aaPredicted RBP18.66■□□□□ 0.58
CLN6-220ENST00000637450 TSPAN11A1L157 253 aa18.65■□□□□ 0.58
CLN6-220ENST00000637450 LMO7DNF2Z398 122 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms