RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 TBC1D3CQ6IPX1 549 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 KDM7AQ6ZMT4 941 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 TBC1D3Q8IZP1 549 aaPredicted RBP11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 TEX26Q8N6G2 289 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 EXD1Q8NHP7 514 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 FOXJ1Q92949 421 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 SLC6A18Q96N87 628 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 TSGA13Q96PP4 275 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 MYOCQ99972 504 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 FAM118BQ9BPY3 351 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 MGME1Q9BQP7 344 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 HDAC8Q9BY41 377 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 NT5MQ9NPB1 228 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 DYRK4Q9NR20 520 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 VPS45Q9NRW7 570 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 SEPT3Q9UH03 358 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 CA5BQ9Y2D0 317 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 FADS3Q9Y5Q0 445 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 SPEGQ15772 3267 aa11.68□□□□□ -0.54
SPTAN1-229ENST00000636010 ZNF106Q9H2Y7 1883 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 ARID1BQ8NFD5 2236 aaPredicted RBP11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 A0A1W2PQU0 124 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 LRRC72A6NJI9 287 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 MATN3O15232 486 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 SLC7A4O43246 635 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 LATO43561 262 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 RNGTTO60942 597 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 LRP3O75074 770 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 WNT1P04628 370 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CFIP05156 583 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CCDC175P0C221 793 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PRLRP16471 622 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CCNCP24863 283 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 MMP13P45452 471 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 DSC2Q02487 901 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PPIDQ08752 370 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 TRAF2Q12933 501 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PTPRRQ15256 657 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 ODF2Q5BJF6 829 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 MARC1Q5VT66 337 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PEX26Q7Z412 305 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CCDC13Q8IYE1 715 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CNTD1Q8N815 330 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CCNYQ8ND76 341 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PPP1R16AQ96I34 528 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 LRIG1Q96JA1 1093 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 SMIM14Q96QK8 99 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CPEB1Q9BZB8 566 aaKnown RBP11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PCED1AQ9H1Q7 454 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CAAP1Q9H8G2 361 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 C10orf88Q9H8K7 445 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 NOD2Q9HC29 1040 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 CAPN10Q9HC96 672 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 TM9SF3Q9HD45 589 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 FZD3Q9NPG1 666 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 AMFRQ9UKV5 643 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PPP2R2CQ9Y2T4 447 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PCDHGC4Q9Y5F7 938 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 PLXNB3Q9ULL4 1909 aa11.67□□□□□ -0.54
SPTAN1-229ENST00000636010 A0A1W2PPC4 97 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 TSPAN11A1L157 253 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 CCDC66A2RUB6 948 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 TRAFD1O14545 582 aaPredicted RBP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 KRT86O43790 486 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 TIMP2P16035 220 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 CSNK1DP48730 415 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 NSUN2Q08J23 767 aaKnown RBP eCLIP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 NIPAL4Q0D2K0 466 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 AP1B1Q10567 949 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 HNRNPDQ14103 355 aaKnown RBP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 GSE1Q14687 1217 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 PPP2R5EQ16537 467 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 WDR45BQ5MNZ6 344 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 SYCP2LQ5T4T6 812 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 FBXL19Q6PCT2 694 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 SLC23A3Q6PIS1 610 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 RCOR2Q8IZ40 523 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 ARRDC2Q8TBH0 407 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 ECHDC3Q96DC8 303 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 HES6Q96HZ4 224 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 RBM41Q96IZ5 413 aaKnown RBP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 NUDCD1Q96RS6 583 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 IL12RB2Q99665 862 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 SEMA3CQ99985 751 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 RTKNQ9BST9 563 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 EDEM2Q9BV94 578 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 OSBPL1AQ9BXW6 950 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 MAK16Q9BXY0 300 aaKnown RBP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 OSBPL8Q9BZF1 889 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 SUV39H2Q9H5I1 410 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 RBM22Q9NW64 420 aaKnown RBP eCLIP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 TTLL3Q9Y4R7 772 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 CNOT1A5YKK6 2376 aaKnown RBP11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 BPTFQ12830 3046 aa11.66□□□□□ -0.54
SPTAN1-229ENST00000636010 PCNX2A6NKB5 2137 aa11.65□□□□□ -0.54
SPTAN1-229ENST00000636010 A0A0U1RQS6 177 aa11.65□□□□□ -0.54
SPTAN1-229ENST00000636010 A0A1B0GTW7 788 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms