RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	NME1	P15531	152 aa	Known RBP	10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	JUND	P17535	347 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	CHRNB2	P17787	502 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	EPHB2	P29323	1055 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	RFC1	P35251	1148 aa	Predicted RBP	10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	ABL2	P42684	1182 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	HDAC4	P56524	1084 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	JAM2	P57087	298 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	RHOA	P61586	193 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	CCDC173	Q0VFZ6	552 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	PTK2B	Q14289	1009 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	FGL2	Q14314	439 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	FZD2	Q14332	565 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	MYLK3	Q32MK0	819 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	TBC1D25	Q3MII6	688 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	RAB6C	Q53S08	254 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	CFAP58	Q5T655	872 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	FAM72A	Q5TYM5	149 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	CDKAL1	Q5VV42	579 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	FAM72D	Q6L9T8	149 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	SASS6	Q6UVJ0	657 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	GDPD4	Q6W3E5	623 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	SLFN11	Q7Z7L1	901 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	TTC7B	Q86TV6	843 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	NLRP14	Q86W24	1093 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	FAM72B	Q86X60	149 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	PAF1	Q8N7H5	531 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	LMX1A	Q8TE12	382 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	CXorf40A	Q8TE69	158 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	BTN2A2	Q8WVV5	523 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	GLMN	Q92990	594 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	NTAN1	Q96AB6	310 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	BMF	Q96LC9	184 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	KLHL32	Q96NJ5	620 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	FCRL3	Q96P31	734 aa	Predicted RBP	10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	LENG8	Q96PV6	779 aa	Predicted RBP	10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	IL12RB2	Q99665	862 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	RAB6C	Q9H0N0	254 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	APOBEC3B	Q9UH17	382 aa	Known RBP	10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	PCDHB1	Q9Y5F3	818 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	CHD5	Q8TDI0	1954 aa		10.51	□□□□□ -0.73
UBE3A-223	ENST00000631247	CPED1	A4D0V7	1026 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	EPHB6	O15197	1021 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CCP110	O43303	1012 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	KDELR3	O43731	214 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CREB3	O43889	395 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	USP12	O75317	370 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	TM7SF2	O76062	418 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CD160	O95971	181 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	MPO	P05164	745 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	MYF5	P13349	255 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CDK11B	P21127	795 aa	Known RBP	10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	RPIA	P49247	311 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	PCBP4	P57723	403 aa	Known RBP	10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	GABRE	P78334	506 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	MYL5	Q02045	173 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	NR0B2	Q15466	257 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CDKN3	Q16667	212 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CLEC16A	Q2KHT3	1053 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	DEFB133	Q30KQ1	61 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	LRRC73	Q5JTD7	316 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	ARTN	Q5T4W7	220 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	BROX	Q5VW32	411 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	DCUN1D2	Q6PH85	259 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	VPS36	Q86VN1	386 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	LSMEM2	Q8N112	164 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	RTL3	Q8N8U3	475 aa	Known RBP	10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	FAM181A	Q8N9Y4	354 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	C3orf20	Q8ND61	904 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	ZNF248	Q8NDW4	579 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CASKIN2	Q8WXE0	1202 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	ASB12	Q8WXK4	309 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	MCEE	Q96PE7	176 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	BBC3	Q96PG8	261 aa	Predicted RBP	10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	C1QTNF2	Q9BXJ5	285 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	SLC13A1	Q9BZW2	595 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	TTYH3	Q9C0H2	523 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CATSPERB	Q9H7T0	1116 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	SYNDIG1	Q9H7V2	258 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	GPR27	Q9NS67	375 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	FANCL	Q9NW38	375 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	SPAST	Q9UBP0	616 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	GGT7	Q9UJ14	662 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	DOLK	Q9UPQ8	538 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	NEU3	Q9UQ49	428 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	CSNK1G3	Q9Y6M4	447 aa		10.5	□□□□□ -0.73
UBE3A-223	ENST00000631247	HELZ2	Q9BYK8	2649 aa	Known RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	LGALS16	A8MUM7	142 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	FGF10	O15520	208 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	CCDC172	P0C7W6	258 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	GIMD1	P0DJR0	217 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	UNG	P13051	313 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	ANP32A	P39687	249 aa	Known RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	ZNF143	P52747	638 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	COPB1	P53618	953 aa	Known RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	AIF1	P55008	147 aa		10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	GSC	P56915	257 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	YBEY	P58557	167 aa	Predicted RBP	10.49	□□□□□ -0.73
UBE3A-223	ENST00000631247	PFN3	P60673	137 aa		10.49	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms