RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 COQ8BQ96D53 544 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 WDFY2Q96P53 400 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 YME1L1Q96TA2 773 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 H2AFJQ9BTM1 129 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 PRKRIP1Q9H875 184 aaPredicted RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 POLR1BQ9H9Y6 1135 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 SPATS2LQ9NUQ6 558 aaKnown RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 HAUS2Q9NVX0 235 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 SLC4A4Q9Y6R1 1079 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 ZMYM2Q9UBW7 1377 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 A0A0U1RQF3 1178 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 FAM237BA0A1B0GVD1 139 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 LRRC53A6NM62 1247 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 AGAP14A8MT82 685 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 KLRF2D3W0D1 207 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 GTPBP1O00178 669 aaKnown RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 AP3D1O14617 1153 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 AHCYL1O43865 530 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 EIF2S1P05198 315 aaKnown RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 RFC1P35251 1148 aaPredicted RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 GNAQP50148 359 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 CLCN5P51795 746 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 SSBP2P81877 361 aaPredicted RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 SRSF4Q08170 494 aaKnown RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 PPP2R5BQ15173 497 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 KLHL24Q6TFL4 600 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 CCDC129Q6ZRS4 1044 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 LURAP1LQ8IV03 231 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.3□□□□□ -1.72
CDR1-202ENST00000625883 TTC39CQ8N584 583 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 WDTC1Q8N5D0 677 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 PDILTQ8N807 584 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 FRMD1Q8N878 549 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 GTF3C6Q969F1 213 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 FAM149B1Q96BN6 582 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 RNF183Q96D59 192 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 NEUROD6Q96NK8 337 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 BBS4Q96RK4 519 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 MAP7D2Q96T17 732 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 LHPPQ9H008 270 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 KLHL31Q9H511 634 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 SLC6A13Q9NSD5 602 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 HCFC1R1Q9NWW0 138 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 NSMCE4AQ9NXX6 385 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 ABI3Q9P2A4 366 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 ZNF70Q9UC06 446 aaPredicted RBP4.3□□□□□ -1.72
CDR1-202ENST00000625883 VPS28Q9UK41 221 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 PCDHA12Q9UN75 941 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 CARD8Q9Y2G2 431 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 FRMD4BQ9Y2L6 1034 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 LYVE1Q9Y5Y7 322 aa4.3□□□□□ -1.72
CDR1-202ENST00000625883 KLK8O60259 260 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 MT-CYBP00156 380 aaPredicted RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 IRF1P10914 325 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 ITGAXP20702 1163 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 KELP23276 732 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 CD38P28907 300 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 CDAP32320 146 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 DCTDP32321 178 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 GABRB2P47870 512 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 PIP4K2AP48426 406 aaPredicted RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 PPP3CCP48454 512 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 SRSF1Q07955 248 aaKnown RBP eCLIP4.29□□□□□ -1.72
CDR1-202ENST00000625883 CAPSQ13938 189 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 RUNX2Q13950 521 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 FRG1Q14331 258 aaKnown RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 FGFBP1Q14512 234 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 INPP5JQ15735 1006 aaPredicted RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 HIST2H2ACQ16777 129 aaPredicted RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 PLEKHO1Q53GL0 409 aaPredicted RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 NOXA1Q86UR1 476 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 CCDC105Q8IYK2 499 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 GJC3Q8NFK1 279 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 CEP76Q8TAP6 659 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 NEK9Q8TD19 979 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 SNAPC3Q92966 411 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 ARHGEF2Q92974 986 aaKnown RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 NSUN4Q96CB9 384 aaKnown RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 MMABQ96EY8 250 aaPredicted RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 WDR77Q9BQA1 342 aaPredicted RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 MXRA8Q9BRK3 442 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 TKTL2Q9H0I9 626 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 FBRSL1Q9HCM7 1045 aaKnown RBP4.29□□□□□ -1.72
CDR1-202ENST00000625883 PLK2Q9NYY3 685 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 EHD2Q9NZN4 543 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 HAO1Q9UJM8 370 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 COG5Q9UP83 839 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 FAM96BQ9Y3D0 163 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 A3GALT2U3KPV4 340 aa4.29□□□□□ -1.72
CDR1-202ENST00000625883 RSF1Q96T23 1441 aaPredicted RBP4.28□□□□□ -1.72
CDR1-202ENST00000625883 USP17L23D6RBM5 183 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 STMND1H3BQB6 276 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 MDM4O15151 490 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 SEC14L5O43304 696 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 HOXB5P09067 269 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 MYZAPP0CAP1 466 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 RARGP13631 454 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 ALOX12P18054 663 aa4.28□□□□□ -1.72
CDR1-202ENST00000625883 CDH2P19022 906 aaPredicted RBP4.28□□□□□ -1.72
CDR1-202ENST00000625883 GARSP41250 739 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms