RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 CCDC13Q8IYE1 715 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 FAM186BQ8IYM0 893 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 GRAMD1CQ8IYS0 662 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 TP53I13Q8NBR0 393 aaPredicted RBP14.08□□□□□ -0.16
SNX1-214ENST00000625244 TCTN2Q96GX1 697 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 CCDC74BQ96LY2 380 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 HEPHQ9BQS7 1158 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 C2orf49Q9BVC5 232 aaPredicted RBP14.08□□□□□ -0.16
SNX1-214ENST00000625244 ZSCAN16Q9H4T2 348 aaPredicted RBP14.08□□□□□ -0.16
SNX1-214ENST00000625244 KIAA1257Q9ULG3 409 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 FBN3Q75N90 2809 aa14.08□□□□□ -0.16
SNX1-214ENST00000625244 A0A0D9SEW6 157 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 C16orf96A6NNT2 1141 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 CLDN11O75508 207 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 CALCAP01258 141 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 PRF1P14222 555 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 NR2F2P24468 414 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 GKP32189 559 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 MXI1P50539 228 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 DNA2P51530 1060 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 SRP54P61011 504 aaKnown RBP14.07□□□□□ -0.16
SNX1-214ENST00000625244 MRPL49Q13405 166 aaKnown RBP14.07□□□□□ -0.16
SNX1-214ENST00000625244 C14orf28Q4W4Y0 310 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 UBR7Q8N806 425 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 FAM46DQ8NEK8 389 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 STARD8Q92502 1023 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 KIAA1143Q96AT1 154 aaPredicted RBP14.07□□□□□ -0.16
SNX1-214ENST00000625244 HAPLN3Q96S86 360 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 RBM15Q96T37 977 aaKnown RBP eCLIP14.07□□□□□ -0.16
SNX1-214ENST00000625244 SPRY4Q9C004 299 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 OCIAD1Q9NX40 245 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 SLC39A1Q9NY26 324 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 ERRFI1Q9UJM3 462 aaPredicted RBP14.07□□□□□ -0.16
SNX1-214ENST00000625244 TRAF3IP3Q9Y228 551 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 MAP4K5Q9Y4K4 846 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 CCDC168Q8NDH2 2452 aa14.07□□□□□ -0.16
SNX1-214ENST00000625244 NIPBLQ6KC79 2804 aaeCLIP14.06□□□□□ -0.16
SNX1-214ENST00000625244 SYNJ2BP-COX16A0A087WUM0 186 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 B4DGG1 531 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 TOR1BO14657 336 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 POLR2DO15514 142 aaKnown RBP14.06□□□□□ -0.16
SNX1-214ENST00000625244 NUDT21O43809 227 aaKnown RBP14.06□□□□□ -0.16
SNX1-214ENST00000625244 CALUO43852 315 aaPredicted RBP14.06□□□□□ -0.16
SNX1-214ENST00000625244 MMP20O60882 483 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 LDLRP01130 860 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 RHOCP08134 193 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 TCN2P20062 427 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 PEX5P50542 639 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 CCNHP51946 323 aaPredicted RBP14.06□□□□□ -0.16
SNX1-214ENST00000625244 ENPEPQ07075 957 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 IRF4Q15306 451 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 CNGA2Q16280 664 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 EDRF1Q3B7T1 1238 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 CARD16Q5EG05 197 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 ANKS6Q68DC2 871 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 SHC4Q6S5L8 630 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 TIPARPQ7Z3E1 657 aaKnown RBP14.06□□□□□ -0.16
SNX1-214ENST00000625244 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 DCAF4L2Q8NA75 395 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 NLGN4YQ8NFZ3 816 aaPredicted RBP14.06□□□□□ -0.16
SNX1-214ENST00000625244 RAB7BQ96AH8 199 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 MOCOSQ96EN8 888 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 ASPSCR1Q9BZE9 553 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 ZDHHC6Q9H6R6 413 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 MAGEF1Q9HAY2 307 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 COX16Q9P0S2 106 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 KCTD3Q9Y597 815 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 HS3ST4Q9Y661 456 aa14.06□□□□□ -0.16
SNX1-214ENST00000625244 MRPS18BQ9Y676 258 aaKnown RBP14.06□□□□□ -0.16
SNX1-214ENST00000625244 TCP11X1B4DZS4 312 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 TM7SF2O76062 418 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 BRD2P25440 801 aaKnown RBP14.05□□□□□ -0.16
SNX1-214ENST00000625244 MAP4P27816 1152 aaKnown RBP14.05□□□□□ -0.16
SNX1-214ENST00000625244 RPL34P49207 117 aaKnown RBP14.05□□□□□ -0.16
SNX1-214ENST00000625244 CDH4P55283 916 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 MCCD1P59942 119 aaPredicted RBP14.05□□□□□ -0.16
SNX1-214ENST00000625244 MC1RQ01726 317 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 NFATC4Q14934 902 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 KLHL40Q2TBA0 621 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 C5orf22Q49AR2 442 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 ALFQ53S48 1182 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 LRRC73Q5JTD7 316 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 TAF8Q7Z7C8 310 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 ZC3H18Q86VM9 953 aaKnown RBP14.05□□□□□ -0.16
SNX1-214ENST00000625244 AGBL5Q8NDL9 886 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 CCDC112Q8NEF3 446 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 PRR7Q8TB68 274 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 PDCD6IPQ8WUM4 868 aaKnown RBP14.05□□□□□ -0.16
SNX1-214ENST00000625244 VOPP1Q96AW1 172 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 PDXPQ96GD0 296 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 EFHD1Q9BUP0 239 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 FAM204AQ9H8W3 233 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 POPDC2Q9HBU9 364 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 DKK3Q9UBP4 350 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 KLQ9UEF7 1012 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 TLK1Q9UKI8 766 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 PCNX1Q96RV3 2341 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 DCHS2Q6V1P9 2916 aa14.05□□□□□ -0.16
SNX1-214ENST00000625244 NAV3Q8IVL0 2385 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms