RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 NHEJ1Q9H9Q4 299 aaPredicted RBP12.6□□□□□ -0.39
LINC00963-217ENST00000624009 SP110Q9HB58 689 aa12.6□□□□□ -0.39
LINC00963-217ENST00000624009 IL21RQ9HBE5 538 aa12.6□□□□□ -0.39
LINC00963-217ENST00000624009 PCDH18Q9HCL0 1135 aa12.6□□□□□ -0.39
LINC00963-217ENST00000624009 GPR27Q9NS67 375 aa12.6□□□□□ -0.39
LINC00963-217ENST00000624009 SEPT3Q9UH03 358 aa12.6□□□□□ -0.39
LINC00963-217ENST00000624009 IPO11Q9UI26 975 aaKnown RBP12.6□□□□□ -0.39
LINC00963-217ENST00000624009 WASF3Q9UPY6 502 aa12.6□□□□□ -0.39
LINC00963-217ENST00000624009 PKD1L2Q7Z442 2459 aa12.6□□□□□ -0.39
LINC00963-217ENST00000624009 A0A1W2PQ67 120 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 CFAP69A5D8W1 941 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 J3KR12 359 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 DKK1O94907 266 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 CDK4P11802 303 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 TCF4P15884 667 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 IL4RP24394 825 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 MAT2AP31153 395 aaKnown RBP12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ARSEP51690 589 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ADKP55263 362 aaKnown RBP12.59□□□□□ -0.39
LINC00963-217ENST00000624009 CDH6P55285 790 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 AP1S1P61966 158 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 SIM1P81133 766 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-217ENST00000624009 AGERQ15109 404 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ATXN7L2Q5T6C5 722 aaPredicted RBP12.59□□□□□ -0.39
LINC00963-217ENST00000624009 LRRC38Q5VT99 294 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 KYAT3Q6YP21 454 aaKnown RBP12.59□□□□□ -0.39
LINC00963-217ENST00000624009 BBS5Q8N3I7 341 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 SAP25Q8TEE9 199 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 HSPH1Q92598 858 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 FAF2Q96CS3 445 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 MRFAP1L1Q96HT8 127 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 C1QTNF7Q9BXJ2 289 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 SUV39H2Q9H5I1 410 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ATP13A3Q9H7F0 1226 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ZFR2Q9UPR6 939 aaKnown RBP12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ZZEF1O43149 2961 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 CHD6Q8TD26 2715 aa12.59□□□□□ -0.39
LINC00963-217ENST00000624009 ARHGEF17Q96PE2 2063 aaPredicted RBP12.58□□□□□ -0.39
LINC00963-217ENST00000624009 FAM208BQ5VWN6 2430 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 A6NNZ2 444 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 DFFAO00273 331 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 RIOK3O14730 519 aaKnown RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 WNT9AO14904 365 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 SLC31A1O15431 190 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 LCA5LO95447 670 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 EPHA8P29322 1005 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 SERPINA4P29622 427 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 SLC1A1P43005 524 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 HADHBP55084 474 aaKnown RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 POLR2LP62875 67 aaKnown RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 SGCGQ13326 291 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 KRT81Q14533 505 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 UGP2Q16851 508 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 TXNRD3NBQ6F5E7 133 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 LAYNQ6UX15 382 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 SRLQ86TD4 932 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 TTC7BQ86TV6 843 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 CCDC170Q8IYT3 715 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 OR6K2Q8NGY2 324 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 SLC35G2Q8TBE7 412 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 SETD7Q8WTS6 366 aaKnown RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 RFFLQ8WZ73 363 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 ECHDC3Q96DC8 303 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 BTBD6Q96KE9 485 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 CALR3Q96L12 384 aaKnown RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 CHP1Q99653 195 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 CINPQ9BW66 212 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 KLHL11Q9NVR0 708 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 AMACRQ9UHK6 382 aa12.58□□□□□ -0.4
LINC00963-217ENST00000624009 APOBEC2Q9Y235 224 aaKnown RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 DSPP15924 2871 aaKnown RBP12.58□□□□□ -0.4
LINC00963-217ENST00000624009 RP1P56715 2156 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 PLXNB3Q9ULL4 1909 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-217ENST00000624009 NEMP1O14524 444 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 SPINT1O43278 529 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 TNFSF14O43557 240 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 MAFKO60675 156 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 SOCS5O75159 536 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 PEX11BO96011 259 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 THEGLP0DJG4 465 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 TIMP2P16035 220 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 AMPD1P23109 780 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 CES1P23141 567 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 NFKBIAP25963 317 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 GKP32189 559 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 ABL2P42684 1182 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 RABIFP47224 123 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 DPYSL3Q14195 570 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 LBRQ14739 615 aaKnown RBP12.57□□□□□ -0.4
LINC00963-217ENST00000624009 PAFAH1B3Q15102 231 aaKnown RBP12.57□□□□□ -0.4
LINC00963-217ENST00000624009 TMEM52BQ4KMG9 183 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 SEL1L3Q68CR1 1132 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 ERAP2Q6P179 960 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 LEKR1Q6ZMV7 388 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 GCNT7Q6ZNI0 430 aa12.57□□□□□ -0.4
LINC00963-217ENST00000624009 SPATS2Q86XZ4 545 aaKnown RBP12.57□□□□□ -0.4
LINC00963-217ENST00000624009 ATPAF2Q8N5M1 289 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms