RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 SFMBT1Q9UHJ3 866 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 GTF2IRD1Q9UHL9 959 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 RABL2BQ9UNT1 228 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 MSI1O43347 362 aaKnown RBP13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 DENRO43583 198 aaKnown RBP13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 WARSP23381 471 aaKnown RBP13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 ADRA1BP35368 520 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 PRKCZQ05513 592 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 KCNA10Q16322 511 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 RARS2Q5T160 578 aaKnown RBP13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 GRIN3AQ8TCU5 1115 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 ERLEC1Q96DZ1 483 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 MFSD3Q96ES6 412 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 APBA2Q99767 749 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 ABT1Q9ULW3 272 aaKnown RBP13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 FAM32AQ9Y421 112 aaKnown RBP13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 FADS3Q9Y5Q0 445 aa13.55□□□□□ -0.24
PCDHB17P-202ENST00000623466 GABRDO14764 452 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 MOCS2O96007 188 aaPredicted RBP13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 TFPTP0C1Z6 253 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 ARSAP15289 507 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 ARPC4P59998 168 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 ADGRE1Q14246 886 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 FAM219BQ5XKK7 198 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 BNC2Q6ZN30 1099 aaPredicted RBP13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 ARHGAP36Q6ZRI8 547 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 SPATA6LQ8N4H0 392 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 MYLPFQ96A32 169 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 KLHL32Q96NJ5 620 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 FERMT1Q9BQL6 677 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 TKTL2Q9H0I9 626 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 C6orf203Q9P0P8 240 aaPredicted RBP13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 RIMS3Q9UJD0 308 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 B4GALT3O60512 393 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 CSPG5O95196 566 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 C2P06681 752 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 POLBP06746 335 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 FGFR3P22607 806 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 GLDCP23378 1020 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 DAOAP59103 153 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 ZNF423Q2M1K9 1284 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 RGMBQ6NW40 437 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 STRADAQ7RTN6 431 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 NUP93Q8N1F7 819 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 TOP6BLQ8N6T0 577 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 B3GALT6Q96L58 329 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 NPAS2Q99743 824 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 RTP3Q9BQQ7 232 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 HEPHQ9BQS7 1158 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 KATNAL1Q9BW62 490 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 SENP6Q9GZR1 1112 aaPredicted RBP13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 NOD1Q9Y239 953 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 TRPV2Q9Y5S1 764 aa13.54□□□□□ -0.24
PCDHB17P-202ENST00000623466 RGSL1A5PLK6 1076 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 AP1G1O43747 822 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TRIM13O60858 407 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 THRAP10827 490 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 AVPR1AP37288 418 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TPI1P60174 286 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 OR10T2Q8NGX3 314 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 WDR6Q9NNW5 1121 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 FIS1Q9Y3D6 152 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TMEM233B4DJY2 109 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ZBTB24O43167 697 aaPredicted RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 PHGDHO43175 533 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 PIGNO95427 931 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 NAGLUP54802 743 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 LPIN1Q14693 890 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ARL13AQ5H913 290 aaPredicted RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 CERCAMQ5T4B2 595 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 CYS1Q717R9 158 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 SCN4BQ8IWT1 228 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 SNX31Q8N9S9 440 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 DNAAF3Q8N9W5 541 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 SREK1Q8WXA9 508 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TMIGD2Q96BF3 282 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ZNF512Q96ME7 567 aaPredicted RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 MTG1Q9BT17 334 aaPredicted RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ATXN3LQ9H3M9 355 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 Q9H521 79 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 WDCPQ9H6R7 721 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 NMRAL1Q9HBL8 299 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 KIAA1522Q9P206 1035 aaPredicted RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 SLC39A10Q9ULF5 831 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 STAP1Q9ULZ2 295 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 RBMX2Q9Y388 322 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 ADAM23O75077 832 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 DUSP11O75319 330 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 RNASEH2AO75792 299 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 LRPAP1P30533 357 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 SLC5A2P31639 672 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 GARSP41250 739 aaKnown RBP13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 NR2C2P49116 596 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 INSCQ1MX18 579 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 PIGGQ5H8A4 983 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 TAF2Q6P1X5 1199 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 C4orf22Q6V702 233 aa13.53□□□□□ -0.24
PCDHB17P-202ENST00000623466 OTOP3Q7RTS5 596 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms