RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 HMGB4Q8WW32 186 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 NELL1Q92832 810 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 FAM131CQ96AQ9 280 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 KLHL32Q96NJ5 620 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 LRFN3Q9BTN0 628 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 DDX47Q9H0S4 455 aaKnown RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 GBA3Q9H227 469 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 PABPC3Q9H361 631 aaKnown RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 USP36Q9P275 1121 aaKnown RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 RSPH14Q9UHP6 348 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 RPL26L1Q9UNX3 145 aaKnown RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 PPIL1Q9Y3C6 166 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
LINC00963-216ENST00000623185 NYNRINQ9P2P1 1898 aaKnown RBP12.59□□□□□ -0.39
LINC00963-216ENST00000623185 TRIOO75962 3097 aa12.58□□□□□ -0.39
LINC00963-216ENST00000623185 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-216ENST00000623185 LOC285095A0A1B0GVY8 99 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 TSPAN11A1L157 253 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 GOLGA6CA6NDK9 693 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 GOLGA6BA6NDN3 693 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 C16orf96A6NNT2 1141 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 KPNA3O00505 521 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-216ENST00000623185 AXIN1O15169 862 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 MID1O15344 667 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 SLC7A4O43246 635 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 GJB3O75712 270 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 METTL18O95568 372 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 ECEL1O95672 775 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 GAS8O95995 478 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 PRLP01236 227 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 KRT14P02533 472 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 UGT2B4P06133 528 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 GOLGA6DP0CG33 693 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 NFKB1P19838 968 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 OXTRP30559 389 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 FDFT1P37268 417 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 CD86P42081 329 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 PTGIRP43119 386 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 GEMP55040 296 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 CSTF1Q05048 431 aaKnown RBP12.58□□□□□ -0.4
LINC00963-216ENST00000623185 TTC31Q49AM3 519 aaPredicted RBP12.58□□□□□ -0.4
LINC00963-216ENST00000623185 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
LINC00963-216ENST00000623185 ARMC12Q5T9G4 340 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 ANO7Q6IWH7 933 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 ERN2Q76MJ5 926 aaKnown RBP12.58□□□□□ -0.4
LINC00963-216ENST00000623185 MAATS1Q7Z4T9 603 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 TTC7BQ86TV6 843 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 CEP112Q8N8E3 955 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 SPATA22Q8NHS9 363 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 CCHCR1Q8TD31 782 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 RAB7BQ96AH8 199 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 HHIPQ96QV1 700 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 RBM15Q96T37 977 aaKnown RBP eCLIP12.58□□□□□ -0.48e-6■■■■■ 30.1
LINC00963-216ENST00000623185 PRRX2Q99811 253 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 OMDQ99983 421 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 NEUROG2Q9H2A3 272 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 KDM4CQ9H3R0 1056 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 PCDH9Q9HC56 1237 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 DYRK4Q9NR20 520 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 FBXL12Q9NXK8 326 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 GOLGA6AQ9NYA3 693 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 BCCIPQ9P287 314 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC00963-216ENST00000623185 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 PHTF1Q9UMS5 762 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 TTLL3Q9Y4R7 772 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 RAI2Q9Y5P3 530 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 MUC3AQ02505 3323 aa12.58□□□□□ -0.4
LINC00963-216ENST00000623185 TTC28Q96AY4 2481 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 ERI2A8K979 691 aaKnown RBP12.57□□□□□ -0.4
LINC00963-216ENST00000623185 GALR2O43603 387 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-216ENST00000623185 PGLSO95336 258 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 MT-CYBP00156 380 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-216ENST00000623185 ZSCAN5DPP0CG00 497 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 ETS1P14921 441 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 TIMP2P16035 220 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 NFKBIAP25963 317 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 CNR2P34972 360 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 DRD3P35462 400 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 PSMD8P48556 350 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 TPMTP51580 245 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 DR1Q01658 176 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 CDK18Q07002 472 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 DHX34Q14147 1143 aaKnown RBP12.57□□□□□ -0.4
LINC00963-216ENST00000623185 UGP2Q16851 508 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 USP39Q53GS9 565 aaKnown RBP12.57□□□□□ -0.4
LINC00963-216ENST00000623185 FAM182AQ5T1J6 154 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 KCTD11Q693B1 232 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 CCDC70Q6NSX1 233 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 FBXL19Q6PCT2 694 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 RANBP10Q6VN20 620 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.57□□□□□ -0.4
LINC00963-216ENST00000623185 WDR5BQ86VZ2 330 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 LONP2Q86WA8 852 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 KLHL7Q8IXQ5 586 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 HDDC3Q8N4P3 179 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 AADATQ8N5Z0 425 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 GLIS1Q8NBF1 620 aa12.57□□□□□ -0.4
LINC00963-216ENST00000623185 GRIN3AQ8TCU5 1115 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms