RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ERLEC1Q96DZ1 483 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 OXNAD1Q96HP4 312 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 NSMCE3Q96MG7 304 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 TUBGCP5Q96RT8 1024 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 FAM129BQ96TA1 746 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 GORASP1Q9BQQ3 440 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 POLMQ9NP87 494 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 VPS45Q9NRW7 570 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 WASF2Q9Y6W5 498 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 ANXA9O76027 345 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 C7P10643 843 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 CD86P42081 329 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 VPS41P49754 854 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 GPS1Q13098 491 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 SEMA5AQ13591 1074 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 PRPSAP1Q14558 356 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 KCTD19Q17RG1 926 aaPredicted RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 GLE1Q53GS7 698 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 ANO7Q6IWH7 933 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 KIAA1211LQ6NV74 962 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 DSG4Q86SJ6 1040 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 LONP2Q86WA8 852 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 SPATA22Q8NHS9 363 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 RBM15Q96T37 977 aaKnown RBP eCLIP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 TRIM51Q9BSJ1 452 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 LRRC1Q9BTT6 524 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 ETNK1Q9HBU6 452 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 RAB6BQ9NRW1 208 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 IL36AQ9UHA7 158 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 ASIC3Q9UHC3 531 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 FAM153AQ9UHL3 310 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 AAR2Q9Y312 384 aaKnown RBP20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 PCDHGA2Q9Y5H1 932 aa20.05■□□□□ 0.8
PDLIM2-221ENST00000622702 TCRBV21S2A2A0A5A6 115 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 ALDH1A2O94788 518 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 SLU7O95391 586 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 PRNPP04156 253 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 MRPS25P82663 173 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 MPP3Q13368 585 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 ZC3H14Q6PJT7 736 aaKnown RBP20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 TMIEQ8NEW7 156 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 OR2T3Q8NH03 318 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 ERP44Q9BS26 406 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 OSBPL1AQ9BXW6 950 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 RSPH9Q9H1X1 276 aaPredicted RBP20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 ZDHHC6Q9H6R6 413 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 ATP13A3Q9H7F0 1226 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 PPM1HQ9ULR3 514 aa20.04■□□□□ 0.8
PDLIM2-221ENST00000622702 FANCMQ8IYD8 2048 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 F5H423 210 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 SOCS5O75159 536 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 MT-CYBP00156 380 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 CTSLP07711 333 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 IVDP26440 423 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 GKP32189 559 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 GEMP55040 296 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 BCL2L1Q07817 233 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 FAXCQ5TGI0 409 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 KDELC1Q6UW63 502 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 LRRC45Q96CN5 670 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 ZNF641Q96N77 438 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 MLPHQ9BV36 600 aaPredicted RBP20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 EBF1Q9UH73 591 aa20.03■□□□□ 0.8
PDLIM2-221ENST00000622702 CCDC163A0A0D9SF12 145 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 GOLGA6CA6NDK9 693 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 GOLGA6BA6NDN3 693 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 ERI2A8K979 691 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 TRAFD1O14545 582 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 AXIN1O15169 862 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 HTRA2O43464 458 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 LEFTY1O75610 366 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 GOLGA6DP0CG33 693 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 SERPINA4P29622 427 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 ADCY8P40145 1251 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 NBL1P41271 181 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 MAGEA6P43360 314 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 COPAP53621 1224 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 TUBB4BP68371 445 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 ARSIQ5FYB1 569 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 DUPD1Q68J44 220 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 KCTD11Q693B1 232 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 WDR5BQ86VZ2 330 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 TAB3Q8N5C8 712 aaPredicted RBP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 MDGA1Q8NFP4 955 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 GRIN3AQ8TCU5 1115 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 HMGB4Q8WW32 186 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 SPOCK2Q92563 424 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 TDRD1Q9BXT4 1180 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 RAB17Q9H0T7 212 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 EIF2B3Q9NR50 452 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 GOLGA6AQ9NYA3 693 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 UBP1Q9NZI7 540 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 BCCIPQ9P287 314 aaKnown RBP eCLIP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 UTP11Q9Y3A2 253 aaKnown RBP20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 PCDHGC4Q9Y5F7 938 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 RAI2Q9Y5P3 530 aa20.02■□□□□ 0.8
PDLIM2-221ENST00000622702 USP34Q70CQ2 3546 aa20.02■□□□□ 0.79
PDLIM2-221ENST00000622702 EFCAB8A8MWE9 144 aa20.01■□□□□ 0.79
PDLIM2-221ENST00000622702 RIOK3O14730 519 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms