RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 LINC01465Q8N7H1 131 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 GRIN3AQ8TCU5 1115 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 APBB2Q92870 758 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 ZUFSPQ96AP4 578 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 C18orf25Q96B23 403 aaPredicted RBP12.59□□□□□ -0.39
LITAF-221ENST00000622633 ASIC4Q96FT7 647 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 MAP6Q96JE9 813 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 FEM1CQ96JP0 617 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 QKIQ96PU8 341 aaKnown RBP eCLIP12.59□□□□□ -0.397e-9■■■■■ 34.6
LITAF-221ENST00000622633 ALPK1Q96QP1 1244 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 TRIT1Q9H3H1 467 aaKnown RBP12.59□□□□□ -0.39
LITAF-221ENST00000622633 DTLQ9NZJ0 730 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 ARPC4-TTLL3A0A0A6YYG9 625 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 A0A0B4J203 849 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 TRIM77I1YAP6 450 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 XPO1O14980 1071 aaKnown RBP12.59□□□□□ -0.39
LITAF-221ENST00000622633 GSRP00390 522 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 HADHAP40939 763 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 ALDH1A3P47895 512 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 POLD2P49005 469 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 SERPINB9P50453 376 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 SESN2P58004 480 aaPredicted RBP12.59□□□□□ -0.39
LITAF-221ENST00000622633 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
LITAF-221ENST00000622633 C19orf57Q0VDD7 668 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 PTK2BQ14289 1009 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 KYAT1Q16773 422 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 EFHC1Q5JVL4 640 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 BSPRYQ5W0U4 402 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 HEATR6Q6AI08 1181 aaKnown RBP12.59□□□□□ -0.39
LITAF-221ENST00000622633 FIP1L1Q6UN15 594 aaKnown RBP12.59□□□□□ -0.39
LITAF-221ENST00000622633 IGFN1Q86VF2 1251 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 AFG1LQ8WV93 481 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 LGMNQ99538 433 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 CCDC106Q9BWC9 280 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 APOL6Q9BWW8 343 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 CEP41Q9BYV8 373 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 VPS45Q9NRW7 570 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 RIC8BQ9NVN3 520 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 SNTG2Q9NY99 539 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 GINS2Q9Y248 185 aa12.59□□□□□ -0.39
LITAF-221ENST00000622633 POLR2AP24928 1970 aaKnown RBP12.58□□□□□ -0.4
LITAF-221ENST00000622633 SNPHO15079 494 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 GSTM1P09488 218 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 RAG1P15918 1043 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 GOT1P17174 413 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 NR2C2P49116 596 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 PHC1P78364 1004 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 BNIP3Q12983 259 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 SEMA5AQ13591 1074 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 GNA13Q14344 377 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 GLRA4Q5JXX5 417 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 PPM1LQ5SGD2 360 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 NDUFAF5Q5TEU4 345 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 NCBP2-AS2Q69YL0 99 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 TIFABQ6ZNK6 161 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 OTOP3Q7RTS5 596 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 IER2Q9BTL4 223 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 C11orf84Q9BUA3 381 aaPredicted RBP12.58□□□□□ -0.4
LITAF-221ENST00000622633 SLC2A11Q9BYW1 496 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 DNMT3BQ9UBC3 853 aaKnown RBP12.58□□□□□ -0.4
LITAF-221ENST00000622633 EMCNQ9ULC0 261 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 MCM3APO60318 1980 aa12.58□□□□□ -0.4
LITAF-221ENST00000622633 ZNF701M0R085 212 aaPredicted RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 MSI1O43347 362 aaKnown RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 GMPRP36959 345 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 N4BP2L1Q5TBK1 243 aaPredicted RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 ARMCX2Q7L311 632 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 TFB1MQ8WVM0 346 aaKnown RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 HTR3CQ8WXA8 447 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 NDRG1Q92597 394 aaKnown RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 CDC14AQ9UNH5 594 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 HES2Q9Y543 173 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 A0A0G2JMZ2 1700 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 LRRC37A2A6NM11 1700 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 MEI4A8MW99 385 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 hCG_2039718K7EN88 272 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 TPP1O14773 563 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 POLR1CO15160 346 aaPredicted RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 SLC22A1O15245 554 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 ALDOAP04075 364 aaKnown RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 MGAT1P26572 445 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 GRM5P41594 1212 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 MLLT3P42568 568 aaPredicted RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 PTPN9P43378 593 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 GJA9P57773 515 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 COX10Q12887 443 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 LAMC2Q13753 1193 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 DNAL1Q4LDG9 190 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 C6orf52Q5T4I8 152 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 UBE2UQ5VVX9 321 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 FRA10AC1Q70Z53 315 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 FAM131BQ86XD5 332 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 PSD4Q8NDX1 1056 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 CENPIQ92674 756 aaPredicted RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 METTL2AQ96IZ6 378 aaKnown RBP12.57□□□□□ -0.4
LITAF-221ENST00000622633 ZNF778Q96MU6 729 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 SCPEP1Q9HB40 452 aa12.57□□□□□ -0.4
LITAF-221ENST00000622633 XPNPEP3Q9NQH7 507 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms