RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 GIMD1P0DJR0 217 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 GZMAP12544 262 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 TIMP2P16035 220 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 DUSP3P51452 185 aaPredicted RBP24.29■■□□□ 1.48
ATXN3-253ENST00000621269 SUOXP51687 545 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 THOP1P52888 689 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 PFN3P60673 137 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 KLHL30Q0D2K2 578 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 GRM3Q14832 879 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 ZNF571Q7Z3V5 609 aaPredicted RBP24.29■■□□□ 1.48
ATXN3-253ENST00000621269 VPS36Q86VN1 386 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 DNAAF5Q86Y56 855 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 ZNF548Q8NEK5 533 aaPredicted RBP24.29■■□□□ 1.48
ATXN3-253ENST00000621269 CENPTQ96BT3 561 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 CELF6Q96J87 481 aaKnown RBP24.29■■□□□ 1.48
ATXN3-253ENST00000621269 USP29Q9HBJ7 922 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 LHX3Q9UBR4 397 aa24.29■■□□□ 1.48
ATXN3-253ENST00000621269 DSPP15924 2871 aaKnown RBP24.28■■□□□ 1.48
ATXN3-253ENST00000621269 ARHGAP42A6NI28 874 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 K7ESM1 405 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 INSIG1O15503 277 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 PRPSAP2O60256 369 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 NEBLO76041 1014 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 SERPINC1P01008 464 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 JUNDP17535 347 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 CFAP58Q5T655 872 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 FAM181AQ8N9Y4 354 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 HCAR2Q8TDS4 363 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 BTN2A2Q8WVV5 523 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 NAP1L5Q96NT1 182 aaPredicted RBP24.28■■□□□ 1.48
ATXN3-253ENST00000621269 WRAP53Q9BUR4 548 aaKnown RBP24.28■■□□□ 1.48
ATXN3-253ENST00000621269 CNOT8Q9UFF9 292 aaKnown RBP24.28■■□□□ 1.48
ATXN3-253ENST00000621269 CSNK1G3Q9Y6M4 447 aa24.28■■□□□ 1.48
ATXN3-253ENST00000621269 PKD1L2Q7Z442 2459 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 A0A1B0GTH6 734 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 J3KR12 359 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 AQP9O43315 295 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 PRAMEF11O60813 436 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 PIGNO95427 931 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 MT-CO3P00414 261 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 ITIH2P19823 946 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 PRKCIP41743 596 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 PAPOLAP51003 745 aaKnown RBP24.27■■□□□ 1.48
ATXN3-253ENST00000621269 YPEL5P62699 121 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 SEMG2Q02383 582 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 ELP6Q0PNE2 266 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 CA9Q16790 459 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 DCBLD1Q8N8Z6 715 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 TRIM11Q96F44 468 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 DCBLD2Q96PD2 775 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 SNRNP25Q9BV90 132 aaKnown RBP24.27■■□□□ 1.48
ATXN3-253ENST00000621269 EDEM3Q9BZQ6 932 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 SLC39A8Q9C0K1 460 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 SUV39H2Q9H5I1 410 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 PDFQ9HBH1 243 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 SCINQ9Y6U3 715 aa24.27■■□□□ 1.48
ATXN3-253ENST00000621269 GP1BAP07359 652 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 MYF5P13349 255 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 RTP5Q14D33 572 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 KLHL40Q2TBA0 621 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 TMEM52BQ4KMG9 183 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 PPP6R3Q5H9R7 873 aaPredicted RBP24.26■■□□□ 1.47
ATXN3-253ENST00000621269 TPRG1LQ5T0D9 272 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 ZCCHC8Q6NZY4 707 aaKnown RBP24.26■■□□□ 1.47
ATXN3-253ENST00000621269 KDM7AQ6ZMT4 941 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 RFX8Q6ZV50 586 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 ARFGAP1Q8N6T3 406 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 LMX1AQ8TE12 382 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 FNIP1Q8TF40 1166 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 ZNF653Q96CK0 615 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 ZNF641Q96N77 438 aaPredicted RBP24.26■■□□□ 1.47
ATXN3-253ENST00000621269 PEBP4Q96S96 227 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 KCTD15Q96SI1 283 aaPredicted RBP24.26■■□□□ 1.47
ATXN3-253ENST00000621269 ABCG4Q9H172 646 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 MRPL47Q9HD33 250 aaKnown RBP24.26■■□□□ 1.47
ATXN3-253ENST00000621269 NCKIPSDQ9NZQ3 722 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 SPASTQ9UBP0 616 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 KLF15Q9UIH9 416 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 TRPM6Q9BX84 2022 aa24.26■■□□□ 1.47
ATXN3-253ENST00000621269 A0A087WV48 116 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 DDX3XO00571 662 aaKnown RBP eCLIP24.25■■□□□ 1.47
ATXN3-253ENST00000621269 TOR1BO14657 336 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 PALMO75781 387 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 MIPP30301 263 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 IGFALSP35858 605 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 EIF2B5Q13144 721 aaKnown RBP24.25■■□□□ 1.47
ATXN3-253ENST00000621269 UGP2Q16851 508 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 ERAP2Q6P179 960 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 PDZD3Q86UT5 571 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 PSTKQ8IV42 348 aaKnown RBP24.25■■□□□ 1.47
ATXN3-253ENST00000621269 TUBGCP5Q96RT8 1024 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 IL12RB2Q99665 862 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 MYO1AQ9UBC5 1043 aa24.25■■□□□ 1.47
ATXN3-253ENST00000621269 DFFAO00273 331 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 OPA1O60313 960 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 MYBL1P10243 752 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 SKILP12757 684 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 ERCC2P18074 760 aa24.24■■□□□ 1.47
ATXN3-253ENST00000621269 ZNF135P52742 658 aaPredicted RBP24.24■■□□□ 1.47
ATXN3-253ENST00000621269 TPM4P67936 248 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms