RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 IGLON5A6NGN9 336 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 AFPP02771 609 aaKnown RBP7.96□□□□□ -1.14
CLK1-215ENST00000621181 L1CAMP32004 1257 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 NOS2P35228 1153 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 PPP1R2P41236 205 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 CSRP3P50461 194 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 SNX16P57768 344 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 RNASE9P60153 205 aaKnown RBP7.96□□□□□ -1.14
CLK1-215ENST00000621181 CLN3Q13286 438 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 PTK2BQ14289 1009 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 ARL13BQ3SXY8 428 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 C5orf22Q49AR2 442 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 BRMS1LQ5PSV4 323 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 PERM1Q5SV97 790 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 C6orf132Q5T0Z8 1188 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 RETSATQ6NUM9 610 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 TTI2Q6NXR4 508 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 OLFML1Q6UWY5 402 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 RAD9BQ6WBX8 426 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 CLEC14AQ86T13 490 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 RBFAQ8N0V3 343 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 WDR48Q8TAF3 677 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 PRR11Q96HE9 360 aaPredicted RBP7.96□□□□□ -1.14
CLK1-215ENST00000621181 CCDC3Q9BQI4 270 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 HEPHQ9BQS7 1158 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 ARHGAP9Q9BRR9 750 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 SPON2Q9BUD6 331 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 SLC13A1Q9BZW2 595 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 TRIM4Q9C037 500 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 ZDHHC6Q9H6R6 413 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 PIGVQ9NUD9 493 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 MPP6Q9NZW5 540 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 STAP1Q9ULZ2 295 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 DOLKQ9UPQ8 538 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 MRFAP1Q9Y605 127 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 ADGRG1Q9Y653 693 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 WASF2Q9Y6W5 498 aa7.96□□□□□ -1.14
CLK1-215ENST00000621181 EFCAB8A8MWE9 144 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 AKR1B15C9JRZ8 316 aaPredicted RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 PLD2O14939 933 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 SPINT1O43278 529 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 AP1G1O43747 822 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 DAB1O75553 588 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 GCATO75600 419 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 GNA14O95837 355 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ERBB2P04626 1255 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ANXA6P08133 673 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 CDK11BP21127 795 aaKnown RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 SERPINH1P50454 418 aaKnown RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 CCNHP51946 323 aaPredicted RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 C1orf61Q13536 156 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ARHGAP44Q17R89 818 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ESRP1Q6NXG1 681 aaKnown RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 USP53Q70EK8 1073 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 PARS2Q7L3T8 475 aaKnown RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 SLC26A9Q7LBE3 791 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 JAMLQ86YT9 394 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 TRIM59Q8IWR1 403 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 SLC35F3Q8IY50 421 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 KRT222Q8N1A0 295 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 RYBPQ8N488 228 aaPredicted RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 PCDH20Q8N6Y1 951 aaKnown RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 C1orf131Q8NDD1 294 aaKnown RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 OR7D4Q8NG98 312 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 NELFBQ8WX92 580 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ARHGEF26Q96DR7 871 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 FAM81BQ96LP2 452 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 LENG8Q96PV6 779 aaPredicted RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 KLF6Q99612 283 aaPredicted RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 CRACR2AQ9BSW2 395 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 BOCQ9BWV1 1114 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 NAA15Q9BXJ9 866 aaKnown RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 TM6SF2Q9BZW4 377 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 CEP44Q9C0F1 390 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ATP13A1Q9HD20 1204 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ARHGEF38Q9NXL2 777 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 RRN3Q9NYV6 651 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 ATXN7L1Q9ULK2 861 aaPredicted RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 CTNND2Q9UQB3 1225 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 SNX10Q9Y5X0 201 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 PTPN13Q12923 2485 aa7.95□□□□□ -1.14
CLK1-215ENST00000621181 COL27A1Q8IZC6 1860 aaPredicted RBP7.95□□□□□ -1.14
CLK1-215ENST00000621181 LMO7DNF2Z398 122 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 CASC3O15234 703 aaKnown RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 TSPAN6O43657 245 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SRGAP2O75044 1071 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 MFAP3LO75121 409 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 ZNF821O75541 412 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 GJB6O95452 261 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 GYPCP04921 128 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 TFE3P19532 575 aaPredicted RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 KRT9P35527 623 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SULT1E1P49888 294 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PDX1P52945 283 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 STX17P56962 302 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 PFN3P60673 137 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 SLC6A3Q01959 620 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 DEUP1Q05D60 604 aa7.94□□□□□ -1.14
CLK1-215ENST00000621181 EIF2B5Q13144 721 aaKnown RBP7.94□□□□□ -1.14
CLK1-215ENST00000621181 CARD16Q5EG05 197 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms