RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 TMEM26Q6ZUK4 368 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 SPPL2CQ8IUH8 684 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 KHSRPQ92945 711 aaKnown RBP eCLIP7.02□□□□□ -1.297e-7■□□□□ 10.6
NEDD9-216ENST00000620854 LRCH3Q96II8 777 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CELF6Q96J87 481 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CNDP1Q96KN2 507 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 RBBP8Q99708 897 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CPNE1Q99829 537 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 MTG1Q9BT17 334 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TRIM15Q9C019 465 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TMEM134Q9H6X4 195 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 KLK14Q9P0G3 267 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ZNF112Q9UJU3 913 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 RAP2CQ9Y3L5 183 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 KIAA1217Q5T5P2 1943 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 COL24A1Q17RW2 1714 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 C9IYK1 514 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 GABBR2O75899 941 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CD4P01730 458 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 RPLP2P05387 115 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 OCM2P0CE71 109 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 OCMP0CE72 109 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ZNF23P17027 643 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CES1P23141 567 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 YWHAQP27348 245 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 MAP4P27816 1152 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CDK9P50750 372 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 GJA9P57773 515 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 MCCD1P59942 119 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CTBSQ01459 385 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 APOFQ13790 326 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 DCAF4L1Q3SXM0 396 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ZIK1Q3SY52 487 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 OTUD3Q5T2D3 398 aaPredicted RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 GRTP1Q5TC63 336 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CLEC6AQ6EIG7 209 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CHSY3Q70JA7 882 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ILDR2Q71H61 639 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 PARP8Q8N3A8 854 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 APBB2Q92870 758 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ISOC1Q96CN7 298 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 FBXL20Q96IG2 436 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TNIP3Q96KP6 325 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 DACH2Q96NX9 599 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ZNF670Q9BS34 389 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 YIPF2Q9BWQ6 316 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 OSBPL6Q9BZF3 934 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 POLR1BQ9H9Y6 1135 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 CXorf21Q9HAI6 301 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 SP110Q9HB58 689 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ZBTB26Q9HCK0 441 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 STARD7Q9NQZ5 370 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 OXSMQ9NWU1 459 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 TRNAU1APQ9NX07 287 aaKnown RBP7.02□□□□□ -1.29
NEDD9-216ENST00000620854 ZNF232Q9UNY5 417 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 PCDHGA4Q9Y5G9 962 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 EVPLQ92817 2033 aa7.02□□□□□ -1.29
NEDD9-216ENST00000620854 PRSS51A0A1B0GVH4 220 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 TYW5A2RUC4 315 aaKnown RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 ACOT8O14734 319 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 HTRA2O43464 458 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 KPNA1P52294 538 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 CDK18Q07002 472 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 CSHL1Q14406 222 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 MFSD10Q14728 455 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 FUT11Q495W5 492 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 BTBD8Q5XKL5 378 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 TAS2R42Q7RTR8 314 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 FAM35AQ86V20 835 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 SNX29P2Q8IUI4 249 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 CLEC4FQ8N1N0 589 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 RTP4Q96DX8 246 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 MAF1Q9H063 256 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 R3HDMLQ9H3Y0 253 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 CLK4Q9HAZ1 481 aaKnown RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 HMX1Q9NP08 348 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 DPP3Q9NY33 737 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 SNX10Q9Y5X0 201 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 GMEB1Q9Y692 573 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 H3BNH8 94 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 EEF2KO00418 725 aaKnown RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 ACKR2O00590 384 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 ZBTB24O43167 697 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 DLX3O60479 287 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 B4GALT4O60513 344 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 MAFO75444 373 aaPredicted RBP7.01□□□□□ -1.29
NEDD9-216ENST00000620854 TADA2AO75478 443 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 NCAM1P13591 858 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 CHRM3P20309 590 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 UGT1A1P22309 533 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 UGT1A4P22310 534 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 UGT1A3P35503 534 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 UGT1A5P35504 534 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 MAGEA8P43361 318 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 PSEN2P49810 448 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 LIMK2P53671 638 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 CDH13P55290 713 aa7.01□□□□□ -1.29
NEDD9-216ENST00000620854 C21orf59P57076 290 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms