RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 CTSLP07711 333 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 KRT7P08729 469 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 PYGMP11217 842 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 CHRNA3P32297 505 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 PCK1P35558 622 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 PTPN9P43378 593 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 ARRB1P49407 418 aaPredicted RBP16.38■□□□□ 0.21
CD40-207ENST00000620709 RWDD4Q6NW29 188 aaKnown RBP16.38■□□□□ 0.21
CD40-207ENST00000620709 MMGT1Q8N4V1 131 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 EID2Q8N6I1 236 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 DCAF4L2Q8NA75 395 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 NOA1Q8NC60 698 aaKnown RBP16.38■□□□□ 0.21
CD40-207ENST00000620709 CHST14Q8NCH0 376 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 ZYG11BQ9C0D3 744 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 KDM4CQ9H3R0 1056 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 CCDC86Q9H6F5 360 aaKnown RBP16.38■□□□□ 0.21
CD40-207ENST00000620709 ATP13A1Q9HD20 1204 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 TPX2Q9ULW0 747 aaKnown RBP16.38■□□□□ 0.21
CD40-207ENST00000620709 CA5BQ9Y2D0 317 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 PTPRBP23467 1997 aa16.38■□□□□ 0.21
CD40-207ENST00000620709 GOLGA6L10A0A0M3HER8 536 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 FAM149AA5PLN7 773 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 CCDC188H7C350 402 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 SLC31A1O15431 190 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 LDOC1O95751 146 aaPredicted RBP16.37■□□□□ 0.21
CD40-207ENST00000620709 CETN2P41208 172 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 NXPH1P58417 271 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 BNIP3Q12983 259 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 NAA30Q147X3 362 aaPredicted RBP16.37■□□□□ 0.21
CD40-207ENST00000620709 C15orf59Q2T9L4 293 aaPredicted RBP16.37■□□□□ 0.21
CD40-207ENST00000620709 CCDC14Q49A88 953 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 SETMARQ53H47 684 aaPredicted RBP16.37■□□□□ 0.21
CD40-207ENST00000620709 RAB6CQ53S08 254 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 ARSIQ5FYB1 569 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 ZFYVE27Q5T4F4 411 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 CCDC70Q6NSX1 233 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 C22orf39Q6P5X5 142 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 DHRS13Q6UX07 377 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 OR2A12Q8NGT7 310 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 EXD1Q8NHP7 514 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 RBM41Q96IZ5 413 aaKnown RBP16.37■□□□□ 0.21
CD40-207ENST00000620709 CNDP2Q96KP4 475 aaKnown RBP16.37■□□□□ 0.21
CD40-207ENST00000620709 HAPLN3Q96S86 360 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 RAB6CQ9H0N0 254 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 IL36AQ9UHA7 158 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 DSPP15924 2871 aaKnown RBP16.37■□□□□ 0.21
CD40-207ENST00000620709 PLXNB3Q9ULL4 1909 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 DOCK9Q9BZ29 2069 aa16.37■□□□□ 0.21
CD40-207ENST00000620709 A0A1W2PQU0 124 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 KRIT1O00522 736 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 LATO43561 262 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 PCDH8O95206 1070 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 ZRANB2O95218 330 aaKnown RBP eCLIP16.36■□□□□ 0.21
CD40-207ENST00000620709 PRNPP04156 253 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 KRT1P04264 644 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 TCF4P15884 667 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 SLC25A11Q02978 314 aaKnown RBP16.36■□□□□ 0.21
CD40-207ENST00000620709 SHBQ15464 509 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 ARL13BQ3SXY8 428 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 ODF2Q5BJF6 829 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 ACBD5Q5T8D3 534 aaPredicted RBP16.36■□□□□ 0.21
CD40-207ENST00000620709 RETSATQ6NUM9 610 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 AADACL2Q6P093 401 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 TMPRSS7Q7RTY8 843 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 SLC13A5Q86YT5 568 aaPredicted RBP16.36■□□□□ 0.21
CD40-207ENST00000620709 RCOR2Q8IZ40 523 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 RYBPQ8N488 228 aaPredicted RBP16.36■□□□□ 0.21
CD40-207ENST00000620709 ARFGAP1Q8N6T3 406 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 MFSD2AQ8NA29 543 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 MDM1Q8TC05 714 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 TSC1Q92574 1164 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 ARRDC3Q96B67 414 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 TMEM51Q9NW97 253 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 DMTF1Q9Y222 760 aa16.36■□□□□ 0.21
CD40-207ENST00000620709 IGLV3-10A0A075B6K4 115 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 ILVBLA1L0T0 632 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 YKT6O15498 198 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 MAGEC1O60732 1142 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 MIPP30301 263 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 TAS2R38P59533 333 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 CCDC15Q0P6D6 951 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 DNAJC3Q13217 504 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 PIP5KL1Q5T9C9 394 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 TRIM69Q86WT6 500 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 SPATS2Q86XZ4 545 aaKnown RBP16.35■□□□□ 0.21
CD40-207ENST00000620709 CCDC50Q8IVM0 306 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 GALNT15Q8N3T1 639 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 SAP25Q8TEE9 199 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 FAM172AQ8WUF8 416 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 MAIP1Q8WWC4 291 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 PREBQ9HCU5 417 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 FZD3Q9NPG1 666 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 FCF1Q9Y324 198 aaKnown RBP16.35■□□□□ 0.21
CD40-207ENST00000620709 GOLGA4Q13439 2230 aaKnown RBP16.35■□□□□ 0.21
CD40-207ENST00000620709 PRAMEF26H0Y7S4 382 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 RNF103O00237 685 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 TAF4O00268 1085 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 PRPSAP2O60256 369 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 SDC3O75056 442 aa16.35■□□□□ 0.21
CD40-207ENST00000620709 EPHA8P29322 1005 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms