RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RBM4Q9BWF3 364 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 CADM1Q9BY67 442 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 ABI2Q9NYB9 513 aaPredicted RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 KLK14Q9P0G3 267 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 POLIQ9UNA4 740 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 COG5Q9UP83 839 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 MYO3AQ8NEV4 1616 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 PXDNLA1KZ92 1463 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 KPNA5O15131 536 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ATP6V0D1P61421 351 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 LSAMPQ13449 338 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ZNF846Q147U1 533 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SYTL3Q4VX76 610 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TXNDC11Q6PKC3 985 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 RNF19AQ9NV58 838 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SH3BP4Q9P0V3 963 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 C3orf18Q9UK00 162 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 CORO2BQ9UQ03 480 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ADGRB3O60242 1522 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 CCDC88CQ9P219 2028 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SLC12A8A0AV02 714 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 FAM220BPB1ANY3 271 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ZNF862O60290 1169 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 LGR5O75473 907 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 STAU1O95793 577 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 USP17L7P0C7H9 530 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TAF1CQ15572 869 aaPredicted RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 TMEM192Q8IY95 271 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 DPP10Q8N608 796 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 RDH11Q8TC12 318 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 METTL6Q8TCB7 284 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TEKT5Q96M29 485 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 DEPDC7Q96QD5 511 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 MUC13Q9H3R2 512 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 IRGMA1A4Y4 181 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 THP07101 528 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 GNAZP19086 355 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 MYL12AP19105 171 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ADRA1BP35368 520 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 PIK3CGP48736 1102 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 HADHBP55084 474 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 PGM5Q15124 567 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 KLHL17Q6TDP4 642 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 IL27RAQ6UWB1 636 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ALYREFQ86V81 257 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 TOP6BLQ8N6T0 577 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ZNF670Q9BS34 389 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 DCUN1D5Q9BTE7 237 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SPATC1LQ9H0A9 340 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 KLHL31Q9H511 634 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 PRKAG3Q9UGI9 489 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SH3GLB1Q9Y371 365 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 POLR1AO95602 1720 aaPredicted RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 ZBTB14O43829 449 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TPPPO94811 219 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 VTNP04004 478 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SERPINF2P08697 491 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 NUP62P37198 522 aaPredicted RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 EPHB3P54753 998 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ZACNQ401N2 412 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 FNBP1LQ5T0N5 605 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 LIPMQ5VYY2 423 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 LCLAT1Q6UWP7 414 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 MAP4K3Q8IVH8 894 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SEPT5Q99719 369 aaPredicted RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 DPY30Q9C005 99 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TRPM5Q9NZQ8 1165 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 NUFIP1Q9UHK0 495 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 AGLP35573 1532 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 AZIN1O14977 448 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TM7SF2O76062 418 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 CPSF4O95639 269 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 BFSP2Q13515 415 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 SPRED3Q2MJR0 410 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 PRAMEF19Q5SWL8 479 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ZNF554Q86TJ5 538 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 C12orf50Q8NA57 414 aaPredicted RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 ENKURQ8TC29 256 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 RAET1EQ8TD07 263 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 BTBD9Q96Q07 612 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 GINS4Q9BRT9 223 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ACTR8Q9H981 624 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TAS2R1Q9NYW7 299 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 DNAJB4Q9UDY4 337 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 CLCA2Q9UQC9 943 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 GSTK1Q9Y2Q3 226 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 TRIM64CA6NLI5 447 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 MBL2P11226 248 aaPredicted RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 ACO1P21399 889 aaKnown RBP3.08□□□□□ -1.92
LPP-221ENST00000618621 THPOP40225 353 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 GNPDA1P46926 289 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 RAB25P57735 213 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 C6orf52Q5T4I8 152 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ZNF544Q6NX49 715 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 DEPDC4Q8N2C3 294 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 ZNF540Q8NDQ6 660 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 MBD2Q9UBB5 411 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 LINC00854A0A1B0GVQ3 168 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 RGS5O15539 181 aa3.08□□□□□ -1.92
LPP-221ENST00000618621 PPP1R11O60927 126 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms