RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 PLEKHA6Q9Y2H5 1048 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 PPP1R3GB7ZBB8 358 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 GLP2RO95838 553 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ANXA5P08758 320 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 SSTR1P30872 391 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 SPIBQ01892 262 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CACNB2Q08289 660 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-208ENST00000618395 GPAT2Q6NUI2 795 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 PUS3Q9BZE2 481 aaKnown RBP15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ELL3Q9HB65 397 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CDH7Q9ULB5 785 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 M0R233 179 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 A1BGP04217 495 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 SLC2A2P11168 524 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ELK3P41970 407 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 TGM3Q08188 693 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ATAD3CQ5T2N8 411 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 IFNL1Q8IU54 200 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CREB3L1Q96BA8 519 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 PI4KBQ9UBF8 816 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 AIPO00170 330 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 LDOC1O95751 146 aaPredicted RBP15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CD4P01730 458 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 RLN2P04090 185 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CSN2P05814 226 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ARFIP1P53367 373 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 TBRG1Q3YBR2 411 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 POMKQ9H5K3 350 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 HSD3B1P14060 373 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CCNYL2Q5T2Q4 361 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF518AQ6AHZ1 1483 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CRTC1Q6UUV9 634 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ANKARQ7Z5J8 1434 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 KCNMB4Q86W47 210 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CREG2Q8IUH2 290 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 CFL2Q9Y281 166 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 KDM5CP41229 1560 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 NDUFS2O75306 463 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 FTH1P02794 183 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 UMPSP11172 480 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 TRIM23P36406 574 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ALDH9A1P49189 494 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 ERVK-9P63128 1117 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 RC3H1Q5TC82 1133 aaKnown RBP15.13■□□□□ 0.01
COL5A1-208ENST00000618395 PRAMEF17Q5VTA0 474 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 TBC1D15Q8TC07 691 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 DYRK1BQ9Y463 629 aa15.13■□□□□ 0.01
COL5A1-208ENST00000618395 C5orf51A6NDU8 294 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 PENKP01210 267 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-208ENST00000618395 PSEN1P49768 467 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MAPKAPK3Q16644 382 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 FBXO33Q7Z6M2 555 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MARK4Q96L34 752 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 TOR1BO14657 336 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 PON1P27169 355 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MAN2A2P49641 1150 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 RGS7P49802 495 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 AQP4P55087 323 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 METTL6Q8TCB7 284 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MGME1Q9BQP7 344 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 CDH22Q9UJ99 828 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 DNM1LO00429 736 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 GZMAP12544 262 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 BMP7P18075 431 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 GRHL2Q6ISB3 625 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 LACRTQ9GZZ8 138 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MAP10Q9P2G4 905 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 HMGXB4Q9UGU5 601 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 SHROOM2Q13796 1616 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 ALYREFQ86V81 257 aaKnown RBP15.12■□□□□ 0.01
COL5A1-208ENST00000618395 CENPSQ8N2Z9 138 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 CCDC24Q8N4L8 307 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 ATAD1Q8NBU5 361 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 SPATA5L1Q9BVQ7 753 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 NUDT15Q9NV35 164 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 PDE10AQ9Y233 779 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 RRP1BQ14684 758 aaKnown RBP15.12■□□□□ 0.01
COL5A1-208ENST00000618395 CCDC71Q8IV32 467 aaPredicted RBP15.12■□□□□ 0.01
COL5A1-208ENST00000618395 WDR49Q8IV35 697 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 OR2T34Q8NGX1 318 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 OR2T3Q8NH03 318 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 TCEAL4Q96EI5 215 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MTRRQ9UBK8 725 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 ZNF69Q9UC07 566 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 ITGA11Q9UKX5 1188 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MATKP42679 507 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 AMIGO1Q86WK6 493 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 NINJ2Q9NZG7 142 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 ERVV-2B6SEH9 535 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MPZL2O60487 215 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 TSPAN1O60635 241 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 STAU1O95793 577 aaKnown RBP15.12■□□□□ 0.01
COL5A1-208ENST00000618395 CD151P48509 253 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 UAP1L1Q3KQV9 507 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 GALNTL5Q7Z4T8 443 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 TRPM4Q8TD43 1214 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 MTMR9Q96QG7 549 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 NT5C1AQ9BXI3 368 aa15.12■□□□□ 0.01
COL5A1-208ENST00000618395 EBF3Q9H4W6 596 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms