RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 PABPC3Q9H361 631 aaKnown RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 SUV39H2Q9H5I1 410 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 FEZ2Q9UHY8 353 aaPredicted RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 SCML1Q9UN30 329 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 KPNA3O00505 521 aaPredicted RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 MT-CYBP00156 380 aaPredicted RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 PSMB4P28070 264 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 PTGIRP43119 386 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 CKAP4Q07065 602 aaKnown RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 BCL2L1Q07817 233 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 DMWDQ09019 674 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 PARP6Q2NL67 630 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 ZNF805Q5CZA5 627 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 ARHGEF18Q6ZSZ5 1173 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 GSTA5Q7RTV2 222 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 KLHL7Q8IXQ5 586 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 CCDC89Q8N998 374 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 HCAR2Q8TDS4 363 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 FAM131CQ96AQ9 280 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 KLHL32Q96NJ5 620 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 ITM2CQ9NQX7 267 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 USP36Q9P275 1121 aaKnown RBP22.9■■□□□ 1.26
CBWD3-213ENST00000618217 DKK3Q9UBP4 350 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 FBXO4Q9UKT5 387 aa22.9■■□□□ 1.26
CBWD3-213ENST00000618217 TSPAN11A1L157 253 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 SOCS5O75159 536 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 ITGB7P26010 798 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 SERPINA4P29622 427 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 POM121L1PQ3SYA9 428 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 KDELC1Q6UW63 502 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 KIAA1324Q6UXG2 1013 aaKnown RBP22.89■■□□□ 1.25
CBWD3-213ENST00000618217 ZSWIM9Q86XI8 627 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 GRK7Q8WTQ7 553 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 BCCIPQ9P287 314 aaKnown RBP eCLIP22.89■■□□□ 1.25
CBWD3-213ENST00000618217 SERGEFQ9UGK8 458 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 RAI2Q9Y5P3 530 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 PLXND1Q9Y4D7 1925 aa22.89■■□□□ 1.25
CBWD3-213ENST00000618217 CCDC163A0A0D9SF12 145 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 F5H423 210 aaPredicted RBP22.88■■□□□ 1.25
CBWD3-213ENST00000618217 FZD6O60353 706 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 PRLP01236 227 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 IGLV3-19P01714 112 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 DNTTP04053 509 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 NUBP1P53384 320 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 C2orf54Q08AI8 447 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 NUMA1Q14980 2115 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 PGBD3Q8N328 593 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 NELL1Q92832 810 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 MLPHQ9BV36 600 aaPredicted RBP22.88■■□□□ 1.25
CBWD3-213ENST00000618217 TDRD1Q9BXT4 1180 aaKnown RBP22.88■■□□□ 1.25
CBWD3-213ENST00000618217 HDAC8Q9BY41 377 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 PCDH9Q9HC56 1237 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 CD93Q9NPY3 652 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 VPS45Q9NRW7 570 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 UBP1Q9NZI7 540 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 PAK5Q9P286 719 aa22.88■■□□□ 1.25
CBWD3-213ENST00000618217 C16orf96A6NNT2 1141 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 PLK4O00444 970 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 KRT14P02533 472 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 TPMTP51580 245 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 CSTF1Q05048 431 aaKnown RBP22.87■■□□□ 1.25
CBWD3-213ENST00000618217 CNTN1Q12860 1018 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 C4orf22Q6V702 233 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 USP30Q70CQ3 517 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 PARS2Q7L3T8 475 aaKnown RBP22.87■■□□□ 1.25
CBWD3-213ENST00000618217 KRT12Q99456 494 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 TPSD1Q9BZJ3 242 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 L2HGDHQ9H9P8 463 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 FAM153AQ9UHL3 310 aa22.87■■□□□ 1.25
CBWD3-213ENST00000618217 ANXA9O76027 345 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 PGLSO95336 258 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 ECEL1O95672 775 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 PDHA1P08559 390 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 P2RY2P41231 377 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 KCTD11Q693B1 232 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 PPP1R16AQ96I34 528 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 RUNDC3BQ96NL0 473 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 TRIB3Q96RU7 358 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 ETNK1Q9HBU6 452 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 FBXL12Q9NXK8 326 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 A0A1W2PP55 124 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 AXIN1O15169 862 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 PMPCBO75439 489 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 GAS8O95995 478 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 TIMP2P16035 220 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 ACTN2P35609 894 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 WNT3AP56704 352 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 TRIP13Q15645 432 aaPredicted RBP22.86■■□□□ 1.25
CBWD3-213ENST00000618217 TTC31Q49AM3 519 aaPredicted RBP22.86■■□□□ 1.25
CBWD3-213ENST00000618217 PIP5KL1Q5T9C9 394 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 BRAT1Q6PJG6 821 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 ERN2Q76MJ5 926 aaKnown RBP22.86■■□□□ 1.25
CBWD3-213ENST00000618217 HDDC3Q8N4P3 179 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 MRGPRX2Q96LB1 330 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 NEUROG2Q9H2A3 272 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 CHKBQ9Y259 395 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 PCDHB9Q9Y5E1 797 aa22.86■■□□□ 1.25
CBWD3-213ENST00000618217 GALR2O43603 387 aaPredicted RBP22.85■■□□□ 1.25
CBWD3-213ENST00000618217 ACADMP11310 421 aa22.85■■□□□ 1.25
CBWD3-213ENST00000618217 FDFT1P37268 417 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms