RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 TIMP2P16035 220 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 HNF1BP35680 557 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 RABIFP47224 123 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 NDST2P52849 883 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 INSM1Q01101 510 aaPredicted RBP22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 TTC7BQ86TV6 843 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 DENND6BQ8NEG7 585 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 RFFLQ8WZ73 363 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 CENPTQ96BT3 561 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 SLC39A8Q9C0K1 460 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 DKK3Q9UBP4 350 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 UBA2Q9UBT2 640 aaPredicted RBP22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 PNMA8BQ9ULN7 279 aaPredicted RBP22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 U3KQA8 63 aa22.49■■□□□ 1.19
NEDD4L-237ENST00000617539 COL27A1Q8IZC6 1860 aaPredicted RBP22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 EEF2KO00418 725 aaKnown RBP22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 PRAMEF11O60813 436 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 MMP20O60882 483 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 NEBLO76041 1014 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 SKILP12757 684 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 MYF5P13349 255 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 MIPP30301 263 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 IGFALSP35858 605 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 KLHL30Q0D2K2 578 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 PDE1CQ14123 709 aaPredicted RBP22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 ERMARDQ5T6L9 678 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 AFMIDQ63HM1 303 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 C19orf48Q6RUI8 117 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 PARGQ86W56 976 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 ARHGAP12Q8IWW6 846 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 NPWQ8N729 165 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 ZNF548Q8NEK5 533 aaPredicted RBP22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 FNIP1Q8TF40 1166 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 ARHGEF26Q96DR7 871 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 CPEB1Q9BZB8 566 aaKnown RBP22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 NLGN3Q9NZ94 848 aa22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 CNOT8Q9UFF9 292 aaKnown RBP22.48■■□□□ 1.19
NEDD4L-237ENST00000617539 SCAMP1O15126 338 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 LRCH4O75427 683 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 CKMT1AP12532 417 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 DESP17661 470 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 RGRP47804 291 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 PAPOLAP51003 745 aaKnown RBP22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 RAD51Q06609 339 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 EIF2B5Q13144 721 aaKnown RBP22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 RFX8Q6ZV50 586 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 ZNF653Q96CK0 615 aa22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 WRAP53Q9BUR4 548 aaKnown RBP22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 MBNL1Q9NR56 388 aaKnown RBP22.47■■□□□ 1.19
NEDD4L-237ENST00000617539 URB1O60287 2271 aaKnown RBP22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 TSPAN11A1L157 253 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 EIF3CLB5ME19 914 aaKnown RBP22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 K7ESM1 405 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 BUB1BO60566 1050 aaPredicted RBP22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 ERCC2P18074 760 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 HNRNPKP61978 463 aaKnown RBP eCLIP22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 DAB2P98082 770 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 FIGNQ5HY92 759 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 HGSNATQ68CP4 663 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 VPS36Q86VN1 386 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 ZSWIM9Q86XI8 627 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 TP53I13Q8NBR0 393 aaPredicted RBP22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 NXPE2Q96DL1 559 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 APOLD1Q96LR9 279 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 EIF3CQ99613 913 aaKnown RBP22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 EDEM3Q9BZQ6 932 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 LRP4O75096 1905 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 IGSF10Q6WRI0 2623 aa22.46■■□□□ 1.19
NEDD4L-237ENST00000617539 SERPINC1P01008 464 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 TCF4P15884 667 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 PBX1P40424 430 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 KLHL40Q2TBA0 621 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 COL28A1Q2UY09 1125 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 ARHGAP36Q6ZRI8 547 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 LUZP1Q86V48 1076 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 TP53INP2Q8IXH6 220 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 DCBLD1Q8N8Z6 715 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 FAM181AQ8N9Y4 354 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 TSEN2Q8NCE0 465 aaKnown RBP22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 ISCUQ9H1K1 167 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 TCEAL2Q9H3H9 227 aaPredicted RBP22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 CBX8Q9HC52 389 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 CACNA1GO43497 2377 aa22.45■■□□□ 1.18
NEDD4L-237ENST00000617539 SYCE3A1L190 88 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 TM7SF2O76062 418 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 RNF8O76064 485 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 HOXB3P14651 431 aaPredicted RBP22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 IL1R2P27930 398 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 DPYSQ14117 519 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 TMEM52BQ4KMG9 183 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 PPP6R3Q5H9R7 873 aaPredicted RBP22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 PSTKQ8IV42 348 aaKnown RBP22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 RBFAQ8N0V3 343 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 CACTIN-AS1Q8N1I8 211 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 CXorf40AQ8TE69 158 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 HNRNPLLQ8WVV9 542 aaKnown RBP22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 NCAPGQ9BPX3 1015 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 SUV39H2Q9H5I1 410 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 PCDH12Q9NPG4 1184 aa22.44■■□□□ 1.18
NEDD4L-237ENST00000617539 DONSONQ9NYP3 566 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms