RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RASSF3Q86WH2 238 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 MAML2Q8IZL2 1156 aaPredicted RBP15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 HDDC3Q8N4P3 179 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 PAF1Q8N7H5 531 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 GANCQ8TET4 914 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 ZNF641Q96N77 438 aaPredicted RBP15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 OSBPL1AQ9BXW6 950 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 PABPC3Q9H361 631 aaKnown RBP15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 PAK5Q9P286 719 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 EBF1Q9UH73 591 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 PCYOX1Q9UHG3 505 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 RAI2Q9Y5P3 530 aa15.78■□□□□ 0.12
PCDHGC3-204ENST00000617222 C16orf96A6NNT2 1141 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 TRAFD1O14545 582 aaPredicted RBP15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 PMPCBO75439 489 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 ECEL1O95672 775 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 C7P10643 843 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 PTGIRP43119 386 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 DMWDQ09019 674 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 TRAF2Q12933 501 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 FAXCQ5TGI0 409 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 AADATQ8N5Z0 425 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 PDCD6IPQ8WUM4 868 aaKnown RBP15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 TADA1Q96BN2 335 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 OXNAD1Q96HP4 312 aaPredicted RBP15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 RUNDC3BQ96NL0 473 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 LRFN3Q9BTN0 628 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 TPSD1Q9BZJ3 242 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 DYRK4Q9NR20 520 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 FBXL12Q9NXK8 326 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 FAM153AQ9UHL3 310 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 NEU2Q9Y3R4 380 aa15.77■□□□□ 0.12
PCDHGC3-204ENST00000617222 A0A1W2PP55 124 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 AXIN1O15169 862 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 HTRA2O43464 458 aaPredicted RBP15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 RNASEH2AO75792 299 aaKnown RBP15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 ANXA9O76027 345 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 GAS8O95995 478 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 TDGF1P13385 188 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 HOXA6P31267 233 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 FNTBP49356 437 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 VPS41P49754 854 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 GEMP55040 296 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 WNT3AP56704 352 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 MRPS25P82663 173 aaKnown RBP15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 CNTN1Q12860 1018 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 PPP1R7Q15435 360 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 PCSK7Q16549 785 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 TTC31Q49AM3 519 aaPredicted RBP15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 CFAP58Q5T655 872 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 ARMC12Q5T9G4 340 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 KDELC1Q6UW63 502 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 KDELC2Q7Z4H8 507 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 MNS1Q8NEH6 495 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 PPP1R16AQ96I34 528 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 OMDQ99983 421 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 GORASP1Q9BQQ3 440 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 MLPHQ9BV36 600 aaPredicted RBP15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 NEUROG2Q9H2A3 272 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 ETNK1Q9HBU6 452 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 PCDH9Q9HC56 1237 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 CD93Q9NPY3 652 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 ITM2CQ9NQX7 267 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 RAB6BQ9NRW1 208 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 VPS45Q9NRW7 570 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 DKK3Q9UBP4 350 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 SCML1Q9UN30 329 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 CHKBQ9Y259 395 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 NCKAP1Q9Y2A7 1128 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 PCDHB9Q9Y5E1 797 aa15.76■□□□□ 0.11
PCDHGC3-204ENST00000617222 CKAP5Q14008 2032 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CTAGE15A4D2H0 777 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 SOCS5O75159 536 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 PGLSO95336 258 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 PDHA1P08559 390 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CTAGE8P0CG41 777 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 TIMP2P16035 220 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CA4P22748 312 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 ITGB7P26010 798 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 DRD3P35462 400 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 FDFT1P37268 417 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 TPMTP51580 245 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 DR1Q01658 176 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CDK18Q07002 472 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 SFSWAPQ12872 951 aaKnown RBP15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 GPS1Q13098 491 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 MPP3Q13368 585 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 SLC14A2Q15849 920 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 C4orf22Q6V702 233 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 ERN2Q76MJ5 926 aaKnown RBP15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 PARS2Q7L3T8 475 aaKnown RBP15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 TTC7BQ86TV6 843 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CTAGE6Q86UF2 777 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 FAM124AQ86V42 546 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 ZSWIM9Q86XI8 627 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CTAGE4Q8IX94 777 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 CEP112Q8N8E3 955 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 IPMKQ8NFU5 416 aa15.75■□□□□ 0.11
PCDHGC3-204ENST00000617222 HCAR2Q8TDS4 363 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms