RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SYNCRIPO60506 623 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 H2AFYO75367 372 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 RHOCP08134 193 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 HGFP14210 728 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 NCF1P14598 390 aaPredicted RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 HLA-DPA1P20036 260 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 GALNT2Q10471 571 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FRG1Q14331 258 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 PAFAH1B3Q15102 231 aaKnown RBP5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TIGD2Q4W5G0 525 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 AGMOQ6ZNB7 445 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC24A5Q71RS6 500 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM126BQ8IXS8 530 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZMIZ2Q8NF64 920 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 BEGAINQ9BUH8 593 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 MUC3BQ9H195 1237 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRPC7Q9HCX4 862 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 FZD10Q9ULW2 581 aa5.69□□□□□ -1.5
SYNCRIP-204ENST00000616122 TOGARAM1Q9Y4F4 1720 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DPPA5A6NC42 116 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NT5C1B-RDH14C9J2C7 533 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PRRG1O14668 218 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 MATN3O15232 486 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 INPP4BO15327 924 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ITM2AO43736 263 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF623O75123 536 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TBX18O95935 607 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NFKBIAP25963 317 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ATP5C1P36542 298 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC10A7Q0GE19 358 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PRKG2Q13237 762 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NR6A1Q15406 480 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RGMBQ6NW40 437 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TIFABQ6ZNK6 161 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 FRMD7Q6ZUT3 714 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 LGI2Q8N0V4 545 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PLD6Q8N2A8 252 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM156AQ8NDB6 213 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 LPCAT1Q8NF37 534 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 GPR152Q8TDT2 470 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CINPQ9BW66 212 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDH19Q9H159 772 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CD274Q9NZQ7 290 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PRPF19Q9UMS4 504 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC7A4O43246 635 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 IPO13O94829 963 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PFKMP08237 780 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 HIST1H2AGP0C0S8 130 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 LBPP18428 481 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 AOC1P19801 751 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 HIST1H2ADP20671 130 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 IL1RL1Q01638 556 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 LPCAT4Q643R3 524 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ANO7Q6IWH7 933 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DNAJC14Q6Y2X3 702 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 APLFQ8IW19 511 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DCBLD1Q8N8Z6 715 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DBF4BQ8NFT6 615 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SKA1Q96BD8 255 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 HIST1H2AHQ96KK5 128 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 MARK4Q96L34 752 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF570Q96NI8 536 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 HIST1H2AJQ99878 128 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 WDR83Q9BRX9 315 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 H2AFJQ9BTM1 129 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 DHRS4Q9BTZ2 278 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 THUMPD3Q9BV44 507 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 GBA3Q9H227 469 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CRLS1Q9UJA2 301 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC27A5Q9Y2P5 690 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PCDHB9Q9Y5E1 797 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 MATN2O00339 956 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PEX1O43933 1283 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SH3BP5O60239 455 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RHOQP17081 205 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 VCLP18206 1134 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PEX2P28328 305 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PGGT1BP53609 377 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RHOAP61586 193 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDH18Q13634 790 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SGO1Q5FBB7 561 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TMCO4Q5TGY1 634 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SLC41A1Q8IVJ1 513 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RTL3Q8N8U3 475 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 RDH11Q8TC12 318 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CENPIQ92674 756 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NR1H4Q96RI1 486 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SH3GL3Q99963 347 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 HAUS8Q9BT25 410 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLPBQ9H078 707 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 UBA2Q9UBT2 640 aaPredicted RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PPM1HQ9ULR3 514 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 PKP3Q9Y446 797 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 SPAG17Q6Q759 2223 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 ARL5CA6NH57 179 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 NR5A2O00482 541 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 FGF1P05230 155 aa5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 TUFMP49411 452 aaKnown RBP5.68□□□□□ -1.5
SYNCRIP-204ENST00000616122 GRB14Q14449 540 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms