RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 IKBKGQ9Y6K9 419 aa13.24□□□□□ -0.29
FOXN3-219ENST00000615335 HHLA1C9JL84 531 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 H3BNX3 289 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 H3BRJ5 948 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 LPXNO60711 386 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 VNN2O95498 520 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 CNPP09543 421 aaKnown RBP13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ELK3P41970 407 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 MAGEA11P43364 429 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 SLC6A3Q01959 620 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 UBE3AQ05086 875 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 OVGP1Q12889 678 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ACAP1Q15027 740 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 RAB30Q15771 203 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ZNF829Q3KNS6 432 aaPredicted RBP13.23□□□□□ -0.29
FOXN3-219ENST00000615335 EFHC1Q5JVL4 640 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 PLPP4Q5VZY2 271 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 DARS2Q6PI48 645 aaKnown RBP13.23□□□□□ -0.29
FOXN3-219ENST00000615335 LZTR1Q8N653 840 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 GPR152Q8TDT2 470 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 CHPT1Q8WUD6 406 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 PHF12Q96QT6 1004 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 SLC28A3Q9HAS3 691 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 PNPLA8Q9NP80 782 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 AFF4Q9UHB7 1163 aaKnown RBP13.23□□□□□ -0.29
FOXN3-219ENST00000615335 USP18Q9UMW8 372 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 TMEM114B3SHH9 223 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 H3BSA7 217 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 FCHO1O14526 889 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 GRM6O15303 877 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ABLIM3O94929 683 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 USP17L7P0C7H9 530 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ENDOUP21128 410 aaKnown RBP13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ERVK-21P61565 698 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 RAB33AQ14088 237 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 RAB41Q5JT25 222 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 TPGS2Q68CL5 300 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 SCAMP5Q8TAC9 235 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 NDRG1Q92597 394 aaKnown RBP13.23□□□□□ -0.29
FOXN3-219ENST00000615335 OXNAD1Q96HP4 312 aaPredicted RBP13.23□□□□□ -0.29
FOXN3-219ENST00000615335 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 TMEM120AQ9BXJ8 343 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ULBP1Q9BZM6 244 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 CYP4F11Q9HBI6 524 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ARHGEF4Q9NR80 690 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 ASNSD1Q9NWL6 643 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 IGSF9Q9P2J2 1179 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 N6AMT1Q9Y5N5 214 aa13.23□□□□□ -0.29
FOXN3-219ENST00000615335 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TNFRSF10AO00220 468 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 HAPLN1P10915 354 aaPredicted RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 ATP6V1B1P15313 513 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 PCYT1AP49585 367 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 RGS19P49795 217 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 SLC5A3P53794 718 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 MRPS5P82675 430 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 GPM6BQ13491 265 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TLR1Q15399 786 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 CYTH1Q15438 398 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 LPCAT4Q643R3 524 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 IGDCC3Q8IVU1 814 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 MRPL43Q8N983 215 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 RBM15BQ8NDT2 890 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 ARNTL2Q8WYA1 636 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 THTPAQ9BU02 230 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TSSK1BQ9BXA7 367 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 EMILIN2Q9BXX0 1053 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 CNGB3Q9NQW8 809 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TRNAU1APQ9NX07 287 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 DTNAQ9Y4J8 743 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 PFDN6O15212 129 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 CLASP2O75122 1294 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 ATP5BP06576 529 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 INHBAP08476 426 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 PABPC1P11940 636 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 PEX2P28328 305 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TUFMP49411 452 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 NRLP54845 237 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 YWHAGP61981 247 aaKnown RBP eCLIP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 RPL10AP62906 217 aaKnown RBP13.22□□□□□ -0.29
FOXN3-219ENST00000615335 MMRN1Q13201 1228 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 NOMO1Q15155 1222 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TRIP10Q15642 601 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 LRRC36Q1X8D7 754 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 NPNTQ6UXI9 565 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 SLC44A1Q8WWI5 657 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 FAM149B1Q96BN6 582 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 APOPT1Q96IL0 206 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 OLFM1Q99784 485 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TAGLN3Q9UI15 199 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 IRAK3Q9Y616 596 aa13.22□□□□□ -0.29
FOXN3-219ENST00000615335 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 C2orf71A6NGG8 1288 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 H3BNC9 293 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 PRRG1O14668 218 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 FBXO21O94952 628 aa13.21□□□□□ -0.29
FOXN3-219ENST00000615335 SEC24AO95486 1093 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms