RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 GSNP06396 782 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 C2P06681 752 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ZBTB48P10074 688 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 MPSTP25325 297 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TRIM60Q495X7 471 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ARHGAP36Q6ZRI8 547 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 MON1AQ86VX9 555 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 GPSM1Q86YR5 675 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FAM126BQ8IXS8 530 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 LRRC52Q8N7C0 313 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FBXO30Q8TB52 745 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CASP10Q92851 521 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 NXNL1Q96CM4 212 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 DNAJC1Q96KC8 554 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 EBNA1BP2Q99848 306 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 EMILIN2Q9BXX0 1053 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 MRPL9Q9BYD2 267 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 HAPLN2Q9GZV7 340 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PCDH12Q9NPG4 1184 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CNGB3Q9NQW8 809 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PCDHB8Q9UN66 801 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 GIT1Q9Y2X7 761 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 NCANO14594 1321 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ATXN2Q99700 1313 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 J3KR12 359 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PSMD3O43242 534 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 RNASEH1O60930 286 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 NBNO60934 754 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 USP1O94782 785 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 RTN3O95197 1032 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 GLUD1P00367 558 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ALPIP09923 528 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 HSMCR30P0CW71 290 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CSF2RAP15509 400 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 MC4RP32245 332 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ACVRL1P37023 503 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 MED21Q13503 144 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FASTKQ14296 549 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 INTS6LQ5JSJ4 861 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 UBAP2Q5T6F2 1119 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 IZUMO2Q6UXV1 221 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 DEFB119Q8N690 84 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CLDN19Q8N6F1 224 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 C10orf53Q8N6V4 93 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ZNF296Q8WUU4 475 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 UCMAQ8WVF2 138 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 SMG7Q92540 1137 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 OXNAD1Q96HP4 312 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 ZFYVE19Q96K21 471 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 MIEF1Q9NQG6 463 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 IMP3Q9NV31 184 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 GPSM3Q9Y4H4 160 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 ARL5AQ9Y689 179 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3DA0A087WVF3 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3IA0A087WXS9 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3EA0A087X179 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3KA0A087X1G2 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TRAV19A0A0A6YYK7 116 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3FA6NER0 549 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 C2CD4BA6NLJ0 364 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3LB9A6J9 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PTGES3LE9PB15 166 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 KLHL2O95198 593 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 IGSF6O95976 241 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 C8AP07357 584 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3HP0C7X1 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TPBGLP0DKB5 382 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 UNGP13051 313 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 CHI3L1P36222 383 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 NR2C2P49116 596 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 HDAC4P56524 1084 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PURAQ00577 322 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 ZC3H12BQ5HYM0 836 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3GQ6DHY5 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3CQ6IPX1 549 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PSRC1Q6PGN9 363 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 CAMK1DQ8IU85 385 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PRSS58Q8IYP2 241 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TBC1D3Q8IZP1 549 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 SPPL2AQ8TCT8 520 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.83□□□□□ -1.8
LTN1-207ENST00000614971 COPS7BQ9H9Q2 264 aaPredicted RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 CREBZFQ9NS37 354 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 KCTD3Q9Y597 815 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 LOC102724159A0A0B4J2E5 919 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 EVPLLA8MZ36 301 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 MGEA5O60502 916 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 EDN1P05305 212 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 EPHX1P07099 455 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PWP2Q15269 919 aaKnown RBP3.83□□□□□ -1.8
LTN1-207ENST00000614971 ALFQ53S48 1182 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 TJAP1Q5JTD0 557 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 CMTM8Q8IZV2 173 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 OR13C4Q8NGS5 318 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 RNF145Q96MT1 663 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 PTPN18Q99952 460 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 NAT9Q9BTE0 207 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FOXP3Q9BZS1 431 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 MIOSQ9NXC5 875 aa3.83□□□□□ -1.8
LTN1-207ENST00000614971 FLRT1Q9NZU1 646 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms